FFCP PHASE1:Hg19::chr1:147230974..147230989,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2702 | |EntrezGene=2702 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4279 | |HGNC=4279 | ||
|TSSclassifier=strong | |||
|UniProt=P36382 | |UniProt=P36382 | ||
|association_with_transcript=356bp_to_AB464554,BT019415,BT019416,DQ891889,DQ895075_5end | |association_with_transcript=356bp_to_AB464554,BT019415,BT019416,DQ891889,DQ895075_5end | ||
|cluster_id=chr1:147230974..147230989,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_12_at_GJA5_5end | |description=CAGE_peak_12_at_GJA5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002536!6.23e-17!2;CL:0000039!2.41e-10!7;CL:0000586!2.41e-10!7 | |ontology_enrichment_celltype=CL:0002536!6.23e-17!2;CL:0000039!2.41e-10!7;CL:0000586!2.41e-10!7 | ||
|ontology_enrichment_celltype_v019=CL:0002536;7.14e-26;2!CL:0002541;9.45e-18;3!CL:0000349;1.81e-11;19 | |ontology_enrichment_celltype_v019=CL:0002536;7.14e-26;2!CL:0002541;9.45e-18;3!CL:0000349;1.81e-11;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002536,9.18e-26,2;CL:0002541,9.46e-18,3;CL:0000349,1.91e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.72e-21;10!UBERON:0005564;7.72e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;7.72e-21;10!UBERON:0005564;7.72e-21;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.24e-14!14;UBERON:0000158!5.24e-14!14;UBERON:0000305!9.35e-11!7;UBERON:0004871!1.80e-09!8;UBERON:0002134!2.60e-09!1;UBERON:0005208!2.60e-09!1;UBERON:0005946!2.60e-09!1;UBERON:0005965!2.60e-09!1;UBERON:0002078!2.60e-09!1;UBERON:0000478!4.34e-08!24 | |ontology_enrichment_uberon=UBERON:0005631!5.24e-14!14;UBERON:0000158!5.24e-14!14;UBERON:0000305!9.35e-11!7;UBERON:0004871!1.80e-09!8;UBERON:0002134!2.60e-09!1;UBERON:0005208!2.60e-09!1;UBERON:0005946!2.60e-09!1;UBERON:0005965!2.60e-09!1;UBERON:0002078!2.60e-09!1;UBERON:0000478!4.34e-08!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.81e-26;8!UBERON:0005631;9.44e-21;10!UBERON:0000158;9.44e-21;10!UBERON:0003135;4.69e-19;11!UBERON:0003124;9.45e-18;3!UBERON:0000920;9.45e-18;3!UBERON:0000991;1.61e-10;21!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22!UBERON:0000478;2.67e-09;24!UBERON:0000305;2.18e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0000473;9.81e-26;8!UBERON:0005631;9.44e-21;10!UBERON:0000158;9.44e-21;10!UBERON:0003135;4.69e-19;11!UBERON:0003124;9.45e-18;3!UBERON:0000920;9.45e-18;3!UBERON:0000991;1.61e-10;21!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22!UBERON:0000478;2.67e-09;24!UBERON:0000305;2.18e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000920,9.46e-18,3;UBERON:0005631,3.93e-15,14;UBERON:0000158,3.93e-15,14;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0000478,2.78e-09,24;UBERON:0003124,2.18e-08,7;UBERON:0000305,2.35e-08,7;UBERON:0004871,1.80e-07,8 | |||
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|short_description=p12@GJA5 | |short_description=p12@GJA5 | ||
}} | }} |
Latest revision as of 19:37, 16 September 2015
Short description: | p12@GJA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GJA5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 356bp_to_AB464554, BT019415, BT019416, DQ891889, DQ895075_5end |
EntrezGene: | GJA5 |
HGNC: | 4279 |
UniProt: | P36382 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 9.18e-26 | 2 |
chorionic membrane mesenchymal stem cell | 9.46e-18 | 3 |
extraembryonic cell | 1.91e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
egg chorion | 9.46e-18 | 3 |
extraembryonic membrane | 3.93e-15 | 14 |
membranous layer | 3.93e-15 | 14 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
extraembryonic structure | 2.78e-09 | 24 |
chorion | 2.18e-08 | 7 |
amnion | 2.35e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.80e-07 | 8 |