FFCP PHASE1:Hg19::chr6:166581393..166581398,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6862 | |EntrezGene=6862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11515 | |HGNC=11515 | ||
|TSSclassifier=strong | |||
|UniProt=O15178 | |UniProt=O15178 | ||
|association_with_transcript=-28bp_to_ENST00000366876,uc003qut.1_5end | |association_with_transcript=-28bp_to_ENST00000366876,uc003qut.1_5end | ||
|cluster_id=chr6:166581393..166581398,- | |||
|coexpression_cluster_id=C156 | |coexpression_cluster_id=C156 | ||
|description=CAGE_peak_6_at_T_5end | |description=CAGE_peak_6_at_T_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000242!3.94e-37!2;CL:0000946!8.95e-20!1;CL:0000786!8.95e-20!1;CL:0000980!8.95e-20!1;CL:0000312!1.62e-15!5;CL:0000240!4.26e-13!6;CL:0000311!4.26e-13!6;CL:0000079!4.26e-13!6;CL:0000237!4.26e-13!6;CL:0000036!4.26e-13!6;CL:0000357!4.26e-13!6;CL:0000114!4.26e-13!6;CL:0000785!1.43e-10!2;CL:0000955!1.43e-10!2;CL:0000818!1.43e-10!2;CL:0000954!1.43e-10!2;CL:0000816!1.43e-10!2;CL:1000415!2.72e-10!2;CL:0000362!4.62e-10!8;CL:0000817!1.82e-07!3 | |ontology_enrichment_celltype=CL:0000242!3.94e-37!2;CL:0000946!8.95e-20!1;CL:0000786!8.95e-20!1;CL:0000980!8.95e-20!1;CL:0000312!1.62e-15!5;CL:0000240!4.26e-13!6;CL:0000311!4.26e-13!6;CL:0000079!4.26e-13!6;CL:0000237!4.26e-13!6;CL:0000036!4.26e-13!6;CL:0000357!4.26e-13!6;CL:0000114!4.26e-13!6;CL:0000785!1.43e-10!2;CL:0000955!1.43e-10!2;CL:0000818!1.43e-10!2;CL:0000954!1.43e-10!2;CL:0000816!1.43e-10!2;CL:1000415!2.72e-10!2;CL:0000362!4.62e-10!8;CL:0000817!1.82e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000946;9.37e-99;1!CL:0000786;9.37e-99;1 | |ontology_enrichment_celltype_v019=CL:0000946;9.37e-99;1!CL:0000786;9.37e-99;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,9.37e-99,1;CL:0000786,9.37e-99,1;CL:0000980,9.37e-99,1;CL:0000785,2.74e-50,2;CL:0000955,2.74e-50,2;CL:0000818,2.74e-50,2;CL:0000954,2.74e-50,2;CL:0000816,2.74e-50,2;CL:0000817,4.27e-34,3;CL:0000236,1.86e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000954;2.74e-50;2 | |ontology_enrichment_development_v019=CL:0000954;2.74e-50;2 | ||
|ontology_enrichment_disease=DOID:630!2.25e-19!1;DOID:0050177!2.25e-19!1;DOID:0050427!2.25e-19!1;DOID:4556!1.93e-07!3 | |ontology_enrichment_disease=DOID:630!2.25e-19!1;DOID:0050177!2.25e-19!1;DOID:0050427!2.25e-19!1;DOID:4556!1.93e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:4556;5.96e-34;3!DOID:3908;5.15e-21;5!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | |ontology_enrichment_disease_v019=DOID:4556;5.96e-34;3!DOID:3908;5.15e-21;5!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,5.96e-34,3;DOID:3908,5.15e-21,5;DOID:3905,2.45e-12,9;DOID:1324,5.93e-08,15;DOID:0050615,1.54e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.59e-10!8;UBERON:0003135!2.10e-07!11;UBERON:0002110!2.79e-07!3;UBERON:0006242!2.79e-07!3 | |ontology_enrichment_uberon=UBERON:0000473!7.59e-10!8;UBERON:0003135!2.10e-07!11;UBERON:0002110!2.79e-07!3;UBERON:0006242!2.79e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p6@T | |short_description=p6@T | ||
}} | }} |
Latest revision as of 20:00, 16 September 2015
Short description: | p6@T |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_T_5end |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | -28bp_to_ENST00000366876, uc003qut.1_5end |
EntrezGene: | T |
HGNC: | 11515 |
UniProt: | O15178 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 9.37e-99 | 1 |
plasma cell | 9.37e-99 | 1 |
plasmablast | 9.37e-99 | 1 |
mature B cell | 2.74e-50 | 2 |
pre-B-II cell | 2.74e-50 | 2 |
transitional stage B cell | 2.74e-50 | 2 |
small pre-B-II cell | 2.74e-50 | 2 |
immature B cell | 2.74e-50 | 2 |
precursor B cell | 4.27e-34 | 3 |
B cell | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 5.96e-34 | 3 |
non-small cell lung carcinoma | 5.15e-21 | 5 |
lung carcinoma | 2.45e-12 | 9 |
lung cancer | 5.93e-08 | 15 |
respiratory system cancer | 1.54e-07 | 16 |