FFCP PHASE1:Hg19::chr10:124050568..124050578,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118663 | |EntrezGene=118663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26340 | |HGNC=26340 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000507495_5end | |association_with_transcript=-17bp_to_ENST00000507495_5end | ||
|cluster_id=chr10:124050568..124050578,+ | |||
|coexpression_cluster_id=C2042 | |coexpression_cluster_id=C2042 | ||
|description=CAGE_peak_6_at_BTBD16_5end | |description=CAGE_peak_6_at_BTBD16_5end |
Latest revision as of 20:12, 16 September 2015
Short description: | p6@BTBD16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BTBD16_5end |
Coexpression cluster: | C2042_Urothelial_gall_adenocarcinoma_choriocarcinoma_signet_gastric_bladder |
Association with transcript: | -17bp_to_ENST00000507495_5end |
EntrezGene: | BTBD16 |
HGNC: | 26340 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@BTBD16 |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.02e-88 | 4 |
urothelial cell | 7.02e-88 | 4 |
epithelial cell of gall bladder | 1.48e-12 | 2 |
epithelial cell of stomach | 1.21e-08 | 3 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
urothelium | 1.81e-70 | 5 |
transitional epithelium | 7.47e-59 | 6 |
surface | 2.62e-23 | 1 |
urinary bladder | 3.62e-12 | 2 |
lower urinary tract | 3.62e-12 | 2 |
urinary system structure | 6.68e-12 | 47 |
renal system | 1.17e-11 | 48 |
endo-epithelium | 1.02e-09 | 82 |
gallbladder | 8.31e-09 | 3 |
gall bladder primordium | 8.31e-09 | 3 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.59e-12 | 2 |
Showing 1 to 1 of 1 entries