FFCP PHASE1:Hg19::chr16:50278618..50278635,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:50278618..50278635,+
|short_description=p@chr16:50278618..50278635,+
|description=CAGE_peak_at_chr16:50278618..50278635,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:50278618..50278635,+ | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_at_chr16:50278618..50278635,+ | |||
|id=chr16:50278618..50278635,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.96e-13!43;CL:0000066!1.74e-09!254;CL:0002159!2.21e-09!13;CL:0002368!9.00e-09!13;CL:0000223!7.57e-08!59;CL:0002541!8.33e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.40e-27;3!CL:0002621;2.52e-12;3!CL:0000349;1.31e-11;19!CL:0002537;4.01e-08;5!CL:0000312;9.54e-08;5!CL:0002251;3.50e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.28e-27,3;CL:0002621,2.00e-12,3;CL:0000349,1.15e-11,19;CL:0002537,3.87e-08,5;CL:0000312,1.21e-07,5;CL:0002251,3.31e-07,20;CL:0002076,5.09e-07,42;CL:0000197,9.42e-07,6;CL:0000098,9.42e-07,6;CL:0002167,9.42e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.84e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.76e-09!14;UBERON:0000158!2.76e-09!14;UBERON:0000344!5.17e-08!12;UBERON:0000476!8.33e-07!3;UBERON:0000920!8.33e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.40e-27;3!UBERON:0000920;3.40e-27;3!UBERON:0005631;3.67e-22;10!UBERON:0000158;3.67e-22;10!UBERON:0000478;6.33e-13;24!UBERON:0001723;1.68e-12;3!UBERON:0001033;1.68e-12;3!UBERON:0001949;2.52e-12;3!UBERON:0003929;8.44e-12;7!UBERON:0003350;2.16e-10;8!UBERON:0000344;3.50e-07;20!UBERON:0004923;7.23e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.28e-27,3;UBERON:0005631,1.51e-22,14;UBERON:0000158,1.51e-22,14;UBERON:0003124,1.26e-20,7;UBERON:0000478,5.64e-13,24;UBERON:0001949,2.00e-12,3;UBERON:0001723,2.25e-12,3;UBERON:0001033,2.25e-12,3;UBERON:0010056,2.25e-12,3;UBERON:0004923,7.23e-12,66;UBERON:0003350,1.90e-10,8;UBERON:0000344,3.31e-07,20 | |||
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| ||
|short_description=p@chr16:50278618..50278635,+ | |||
}} | }} |
Latest revision as of 20:16, 16 September 2015
Short description: | p@chr16:50278618..50278635, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50278618..50278635, + |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.28e-27 | 3 |
gingival epithelial cell | 2.00e-12 | 3 |
extraembryonic cell | 1.15e-11 | 19 |
amnion mesenchymal stem cell | 3.87e-08 | 5 |
keratinocyte | 1.21e-07 | 5 |
epithelial cell of alimentary canal | 3.31e-07 | 20 |
endo-epithelial cell | 5.09e-07 | 42 |
receptor cell | 9.42e-07 | 6 |
sensory epithelial cell | 9.42e-07 | 6 |
olfactory epithelial cell | 9.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.28e-27 | 3 |
extraembryonic membrane | 1.51e-22 | 14 |
membranous layer | 1.51e-22 | 14 |
chorion | 1.26e-20 | 7 |
extraembryonic structure | 5.64e-13 | 24 |
gingival epithelium | 2.00e-12 | 3 |
tongue | 2.25e-12 | 3 |
gustatory system | 2.25e-12 | 3 |
future tongue | 2.25e-12 | 3 |
organ component layer | 7.23e-12 | 66 |
epithelium of mucosa | 1.90e-10 | 8 |
mucosa | 3.31e-07 | 20 |