FFCP PHASE1:Hg19::chr16:50278652..50278662,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:50278652..50278662,+ | |||
|coexpression_cluster_id=C86 | |coexpression_cluster_id=C86 | ||
|description=CAGE_peak_at_chr16:50278652..50278662,+ | |description=CAGE_peak_at_chr16:50278652..50278662,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002076!3.89e-11!43;CL:0002541!1.56e-09!3;CL:0000066!5.05e-09!254;CL:0002251!1.34e-08!21;CL:0002322!1.27e-07!5;CL:0000223!4.31e-07!59 | |ontology_enrichment_celltype=CL:0002076!3.89e-11!43;CL:0002541!1.56e-09!3;CL:0000066!5.05e-09!254;CL:0002251!1.34e-08!21;CL:0002322!1.27e-07!5;CL:0000223!4.31e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002541;7.39e-60;3!CL:0000349;3.36e-26;19!CL:0002537;7.82e-17;5!CL:0002253;1.82e-11;2!CL:0001014;2.60e-11;2!CL:0001016;2.60e-11;2!CL:0000134;7.08e-07;55!CL:0000723;9.02e-07;61 | |ontology_enrichment_celltype_v019=CL:0002541;7.39e-60;3!CL:0000349;3.36e-26;19!CL:0002537;7.82e-17;5!CL:0002253;1.82e-11;2!CL:0001014;2.60e-11;2!CL:0001016;2.60e-11;2!CL:0000134;7.08e-07;55!CL:0000723;9.02e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.68e-60,3;CL:0000349,3.19e-26,19;CL:0002537,7.51e-17,5;CL:0002253,1.82e-11,2;CL:0001014,2.47e-11,2;CL:0001016,2.47e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.16e-21;1 | |ontology_enrichment_development_v019=UBERON:0003124;5.16e-21;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.50e-12!12;UBERON:0000476!1.56e-09!3;UBERON:0000920!1.56e-09!3;UBERON:0005631!2.99e-09!14;UBERON:0000158!2.99e-09!14;UBERON:0003729!1.21e-08!5;UBERON:0004923!4.94e-07!57;UBERON:0003124!7.37e-07!7;UBERON:0003343!7.80e-07!4;UBERON:0004785!7.80e-07!4 | |ontology_enrichment_uberon=UBERON:0000344!1.50e-12!12;UBERON:0000476!1.56e-09!3;UBERON:0000920!1.56e-09!3;UBERON:0005631!2.99e-09!14;UBERON:0000158!2.99e-09!14;UBERON:0003729!1.21e-08!5;UBERON:0004923!4.94e-07!57;UBERON:0003124!7.37e-07!7;UBERON:0003343!7.80e-07!4;UBERON:0004785!7.80e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.39e-60;3!UBERON:0000920;7.39e-60;3!UBERON:0005631;1.87e-49;10!UBERON:0000158;1.87e-49;10!UBERON:0000478;1.38e-29;24!UBERON:0000305;2.59e-12;7!UBERON:0000007;4.30e-11;2 | |ontology_enrichment_uberon_v019=UBERON:0003124;7.39e-60;3!UBERON:0000920;7.39e-60;3!UBERON:0005631;1.87e-49;10!UBERON:0000158;1.87e-49;10!UBERON:0000478;1.38e-29;24!UBERON:0000305;2.59e-12;7!UBERON:0000007;4.30e-11;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.68e-60,3;UBERON:0005631,1.25e-50,14;UBERON:0000158,1.25e-50,14;UBERON:0003124,1.77e-45,7;UBERON:0000478,1.31e-29,24;UBERON:0004923,1.48e-14,66;UBERON:0000305,2.51e-12,7;UBERON:0000007,4.52e-11,2;UBERON:0004871,6.61e-11,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0.773043412653187,0,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502644862058154,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.659006605437454,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,0.890894042497916,3.07160702099232,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,6.06102203490647,1.4655614944298,4.79731298416771,0,0,0,0,0,0,0,0,0,0,0,27.4813572472456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0.174118413160805,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0952078182318,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0.733714394086716,0.808679663052368,0,0,0,0.300841313397029,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0,2.39496399439125,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.255640214277473,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0,0,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0.253397002022874,0,0,0.459474497674225,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.336760265072938,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:50278652..50278662,+ | |short_description=p@chr16:50278652..50278662,+ | ||
}} | }} |
Latest revision as of 20:17, 16 September 2015
Short description: | p@chr16:50278652..50278662, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50278652..50278662, + |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.68e-60 | 3 |
extraembryonic cell | 3.19e-26 | 19 |
amnion mesenchymal stem cell | 7.51e-17 | 5 |
epithelial cell of large intestine | 1.82e-11 | 2 |
CD1a-positive Langerhans cell | 2.47e-11 | 2 |
immature CD1a-positive Langerhans cell | 2.47e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.68e-60 | 3 |
extraembryonic membrane | 1.25e-50 | 14 |
membranous layer | 1.25e-50 | 14 |
chorion | 1.77e-45 | 7 |
extraembryonic structure | 1.31e-29 | 24 |
organ component layer | 1.48e-14 | 66 |
amnion | 2.51e-12 | 7 |
pituitary gland | 4.52e-11 | 2 |
somatic layer of lateral plate mesoderm | 6.61e-11 | 8 |