FFCP PHASE1:Hg19::chr1:149821867..149821874,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=337873 | |EntrezGene=337873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=20516 | |HGNC=20516 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=465bp_to_NR_036461_5end | |association_with_transcript=465bp_to_NR_036461_5end | ||
|cluster_id=chr1:149821867..149821874,- | |||
|description=CAGE_peak_1_at_HIST2H2BC_5end | |description=CAGE_peak_1_at_HIST2H2BC_5end | ||
|id=chr1:149821867..149821874,- | |id=chr1:149821867..149821874,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000785;5.06e-13;1!CL:0000228;5.06e-13;1!CL:0002372;5.06e-13;1!CL:0000819;5.06e-13;1!CL:0000312;2.71e-10;5!CL:0000240;1.00e-08;6!CL:0000311;1.00e-08;6!CL:0000079;1.00e-08;6!CL:0000237;1.00e-08;6!CL:0000123;3.81e-07;2!CL:0002262;3.81e-07;2!CL:1000398;3.81e-07;2!CL:0000242;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,4.77e-13,1;CL:0000228,5.38e-13,1;CL:0002372,5.38e-13,1;CL:0000312,3.93e-10,5;CL:0000240,1.36e-08,6;CL:0000311,1.36e-08,6;CL:0000079,1.36e-08,6;CL:0000237,1.36e-08,6;CL:0000036,1.36e-08,6;CL:0000357,1.36e-08,6;CL:0000114,1.36e-08,6;CL:0002262,3.48e-07,2;CL:1000398,3.48e-07,2;CL:0000785,3.70e-07,2;CL:0000955,3.70e-07,2;CL:0000818,3.70e-07,2;CL:0000954,3.70e-07,2;CL:0000816,3.70e-07,2;CL:0000242,4.17e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000357;1.00e-08;6!CL:0000114;1.00e-08;6!CL:0000954;3.81e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;5.06e-13;1!DOID:8675;5.06e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.77e-13,1;DOID:8675,4.77e-13,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;5.06e-13;1!UBERON:0000029;5.06e-13;1!UBERON:0002346;7.03e-13;4!UBERON:0000923;7.03e-13;4!UBERON:0010316;7.03e-13;4!UBERON:0005291;7.03e-13;4!UBERON:0002050;1.73e-10;5!UBERON:0005423;1.73e-10;5!UBERON:0001003;1.42e-07;15!UBERON:0007376;1.42e-07;15!UBERON:0002771;3.81e-07;2!UBERON:0001281;3.81e-07;2!UBERON:0003497;3.81e-07;2!UBERON:0003909;3.81e-07;2!UBERON:0003835;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.32e-13,1;UBERON:0007029,2.62e-13,1;UBERON:0001003,1.50e-07,15;UBERON:0007376,1.50e-07,15;UBERON:0007383,1.50e-07,15;UBERON:0002771,2.91e-07,2;UBERON:0001281,3.48e-07,2;UBERON:0003497,3.48e-07,2;UBERON:0003909,3.48e-07,2;UBERON:0003835,3.48e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0.390178042679635,0.328875809207352,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0.361439152384566,0,0,0.795285947051099,0,0,0.665188192387692,0.175669571386252,0.130979075497713,0,0,0,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0.500474079487857,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0.276149695926898,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0.122988438543114,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,1.49801404789436,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0,0,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0.478278818186467,0.199579371432817,0,0,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0.403599414382095,0.851692475380653,0,0,0,0,0.19538809540204,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0.494411622680279,0.844501632511974,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08342208868187,0.0874599999961957,0.724999575434793,0,0,0,0.344743373241465,0.874813840149763,0,0,0.241192877250816,0,0.442317039724898,0.591095237907095,0,0.10893846351899,0,0,0.113942055847001,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0.451191321234361,0.19606253431774,0.335643173951685,0.189753732724185,0,0,0,0,0.432777279484182,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,1.45963831372533,0,0,0,0,0.30607276163049,0.189559738885464,0.300646838828985,0,0.664653872707185,0.992975867626496,0.313932918407225,0,0,0.277349346026277,0.173559738335131,0,0,0,0.343972064943233,0,0.146178634172371,0.328461828212837,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0.857974989309823,0.14405479798815,0.248505071130865,0,0,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0,0,0,0.599037001496973,0,0,0.201550417460179,0,2.32991899054908,0.236349546921671,0,0.0674035438541849,0.0984274815147488,0,0,0.544813624446302,0,0.137539436597234,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0.414239055347196,1.9846640872478,0,0.487170393523584,0,0,0,0,0,0.157054096250234,0,1.58634144372552,0.1251909307065,0.573409195690071,0,0,0.691743174681154,0.124980407962107,0,0.285465333544967,0.235265819698172,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0.318593534327405,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0.782982875895635,0,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0.389720617678777,0,0,0.655219697692825,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0,0.33946505990805,7.01497236335553,1.23935764259002,0,0,0.23658523500376,0,0,0.3062454773532,0.0642292250964595,0,0.478901577171454,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0.231051332300676,0.381382095467167,0,0,0,0,0,0,0.49131575253029,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,0,0.879356221798103,0.127762427639595,0,0,0,0,0,0.345701962667338,0,0,0,0.354581522651905,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.255640214277473,0,0.4582137370881,0,0,0,0.098150233615243,0,0,0,1.1598144313382,1.94284397223656,0,0.397901550322736,0.475680363110274,0,0.109940516745429,0.150962843566674,0.0771741581079447,0.655678681511872,0.940634592723046,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0.872701380680755,0.5290268405154,0,0,0,0,0.109265571963696,0.506794004045748,0,0,0,0.250707539292375,0,0,0,0.20686599172379,0,0.476128862927481,0.193766729508018,0.496597714366863,0.224263725161227,0,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0.390178042679635,0.328875809207352,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0.361439152384566,0,0,0.795285947051099,0,0,0.665188192387692,0.175669571386252,0.130979075497713,0,0,0,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0.500474079487857,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0.276149695926898,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0.122988438543114,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,1.49801404789436,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0,0,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0.478278818186467,0.199579371432817,0,0,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0.403599414382095,0.851692475380653,0,0,0,0,0.19538809540204,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0.494411622680279,0.844501632511974,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08342208868187,0.0874599999961957,0.724999575434793,0,0,0,0.344743373241465,0.874813840149763,0,0,0.241192877250816,0,0.442317039724898,0.591095237907095,0,0.10893846351899,0,0,0.113942055847001,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0.451191321234361,0.19606253431774,0.335643173951685,0.189753732724185,0,0,0,0,0.432777279484182,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,1.45963831372533,0,0,0,0,0.30607276163049,0.189559738885464,0.300646838828985,0,0.664653872707185,0.992975867626496,0.313932918407225,0,0,0.277349346026277,0.173559738335131,0,0,0,0.343972064943233,0,0.146178634172371,0.328461828212837,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0.857974989309823,0.14405479798815,0.248505071130865,0,0,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0,0,0,0.599037001496973,0,0,0.201550417460179,0,2.32991899054908,0.236349546921671,0,0.0674035438541849,0.0984274815147488,0,0,0.544813624446302,0,0.137539436597234,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0.414239055347196,1.9846640872478,0,0.487170393523584,0,0,0,0,0,0.157054096250234,0,1.58634144372552,0.1251909307065,0.573409195690071,0,0,0.691743174681154,0.124980407962107,0,0.285465333544967,0.235265819698172,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0.318593534327405,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0.782982875895635,0,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0.389720617678777,0,0,0.655219697692825,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0,0.33946505990805,7.01497236335553,1.23935764259002,0,0,0.23658523500376,0,0,0.3062454773532,0.0642292250964595,0,0.478901577171454,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0.231051332300676,0.381382095467167,0,0,0,0,0,0,0.49131575253029,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,0,0.879356221798103,0.127762427639595,0,0,0,0,0,0.345701962667338,0,0,0,0.354581522651905,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.255640214277473,0,0.4582137370881,0,0,0,0.098150233615243,0,0,0,1.1598144313382,1.94284397223656,0,0.397901550322736,0.475680363110274,0,0.109940516745429,0.150962843566674,0.0771741581079447,0.655678681511872,0.940634592723046,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0.872701380680755,0.5290268405154,0,0,0,0,0.109265571963696,0.506794004045748,0,0,0,0.250707539292375,0,0,0,0.20686599172379,0,0.476128862927481,0.193766729508018,0.496597714366863,0.224263725161227,0,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p1@HIST2H2BC | |short_description=p1@HIST2H2BC | ||
}} | }} |
Latest revision as of 20:37, 16 September 2015
Short description: | p1@HIST2H2BC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIST2H2BC_5end |
Coexpression cluster: | NA |
Association with transcript: | 465bp_to_NR_036461_5end |
EntrezGene: | HIST2H2BC |
HGNC: | 20516 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 4.77e-13 | 1 |
multinucleate cell | 5.38e-13 | 1 |
myotube | 5.38e-13 | 1 |
keratinocyte | 3.93e-10 | 5 |
stratified squamous epithelial cell | 1.36e-08 | 6 |
keratin accumulating cell | 1.36e-08 | 6 |
stratified epithelial cell | 1.36e-08 | 6 |
keratinizing barrier epithelial cell | 1.36e-08 | 6 |
epithelial fate stem cell | 1.36e-08 | 6 |
stratified epithelial stem cell | 1.36e-08 | 6 |
surface ectodermal cell | 1.36e-08 | 6 |
endothelial cell of sinusoid | 3.48e-07 | 2 |
endothelial cell of hepatic sinusoid | 3.48e-07 | 2 |
mature B cell | 3.70e-07 | 2 |
pre-B-II cell | 3.70e-07 | 2 |
transitional stage B cell | 3.70e-07 | 2 |
small pre-B-II cell | 3.70e-07 | 2 |
immature B cell | 3.70e-07 | 2 |
Merkel cell | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.32e-13 | 1 |
surface | 2.62e-13 | 1 |
skin epidermis | 1.50e-07 | 15 |
outer epithelium | 1.50e-07 | 15 |
enveloping layer of ectoderm | 1.50e-07 | 15 |
middle temporal gyrus | 2.91e-07 | 2 |
hepatic sinusoid | 3.48e-07 | 2 |
abdomen blood vessel | 3.48e-07 | 2 |
sinusoid | 3.48e-07 | 2 |
abdominal segment blood vessel | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.77e-13 | 1 |
lymphosarcoma | 4.77e-13 | 1 |