FFCP PHASE1:Hg19::chr13:23949624..23949669,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26278 | |EntrezGene=26278 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10519 | |HGNC=10519 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZJ4 | |UniProt=Q9NZJ4 | ||
|association_with_transcript=12bp_to_ENST00000402364,uc001uoo.2_5end | |association_with_transcript=12bp_to_ENST00000402364,uc001uoo.2_5end | ||
|cluster_id=chr13:23949624..23949669,- | |||
|description=CAGE_peak_1_at_SACS_5end | |description=CAGE_peak_1_at_SACS_5end | ||
|id=chr13:23949624..23949669,- | |id=chr13:23949624..23949669,- | ||
|ontology_enrichment_celltype=CL:0000055!2.25e-17!180;CL:0000144!1.41e-12!625;CL:0000057!1.50e-12!75;CL:0002371!1.46e-11!591;CL:0002620!1.70e-10!23;CL:0000003!3.43e-09!722;CL:0000012!4.83e-09!682;CL:0000548!2.47e-08!679;CL:0000004!2.47e-08!679;CL:0000255!2.47e-08!679;CL:0000034!1.60e-07!444;CL:0000048!3.64e-07!430;CL:0000723!4.88e-07!436 | |ontology_enrichment_celltype=CL:0000055!2.25e-17!180;CL:0000144!1.41e-12!625;CL:0000057!1.50e-12!75;CL:0002371!1.46e-11!591;CL:0002620!1.70e-10!23;CL:0000003!3.43e-09!722;CL:0000012!4.83e-09!682;CL:0000548!2.47e-08!679;CL:0000004!2.47e-08!679;CL:0000255!2.47e-08!679;CL:0000034!1.60e-07!444;CL:0000048!3.64e-07!430;CL:0000723!4.88e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.82e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.84e-13,76;CL:0002620,1.70e-10,23;CL:0000034,1.01e-07,441;CL:0000048,2.31e-07,427;CL:0000723,3.12e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.27e-08!83;UBERON:0002329!4.27e-08!83;UBERON:0003077!4.27e-08!83;UBERON:0003059!4.27e-08!83;UBERON:0007282!4.27e-08!83;UBERON:0009618!4.27e-08!83;UBERON:0007285!4.27e-08!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001434;5.13e-07;36 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@SACS | |short_description=p1@SACS | ||
}} | }} |
Latest revision as of 20:47, 16 September 2015
Short description: | p1@SACS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SACS_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000402364, uc001uoo.2_5end |
EntrezGene: | SACS |
HGNC: | 10519 |
UniProt: | Q9NZJ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.84e-13 | 76 |
skin fibroblast | 1.70e-10 | 23 |
stem cell | 1.01e-07 | 441 |
multi fate stem cell | 2.31e-07 | 427 |
somatic stem cell | 3.12e-07 | 433 |