FFCP PHASE1:Hg19::chr5:169659955..169659994,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=133874 | |EntrezGene=133874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37272 | |HGNC=37272 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3I9 | |UniProt=C9J3I9 | ||
|association_with_transcript=5bp_to_NM_001102609,uc003mal.2,uc010jjn.2_5end | |association_with_transcript=5bp_to_NM_001102609,uc003mal.2,uc010jjn.2_5end | ||
|cluster_id=chr5:169659955..169659994,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_C5orf58_5end | |description=CAGE_peak_1_at_C5orf58_5end | ||
|id=chr5:169659955..169659994,+ | |id=chr5:169659955..169659994,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.45e-15!7;CL:0000586!1.45e-15!7;CL:0002322!5.13e-15!5 | |ontology_enrichment_celltype=CL:0000039!1.45e-15!7;CL:0000586!1.45e-15!7;CL:0002322!5.13e-15!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.17e-30;7!CL:0000586;2.17e-30;7!CL:1000415;5.02e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.09e-30,7;CL:0000586,2.09e-30,7;CL:1000415,5.02e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.58e-47;10!UBERON:0005564;1.58e-47;10 | |||
|ontology_enrichment_disease=DOID:3095!1.54e-07!22;DOID:2994!1.54e-07!22 | |ontology_enrichment_disease=DOID:3095!1.54e-07!22;DOID:2994!1.54e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.58e-15;22!DOID:2994;4.58e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.51e-15,22;DOID:2994,4.51e-15,22;DOID:0050687,4.11e-08,143;DOID:305,3.06e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.72e-14!8;UBERON:0003135!1.99e-13!11;UBERON:0003101!1.02e-09!22;UBERON:0000079!1.02e-09!22;UBERON:0007023!6.81e-08!115 | |ontology_enrichment_uberon=UBERON:0000473!3.72e-14!8;UBERON:0003135!1.99e-13!11;UBERON:0003101!1.02e-09!22;UBERON:0000079!1.02e-09!22;UBERON:0007023!6.81e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.05e-59;8!UBERON:0003135;3.33e-43;11!UBERON:0000991;1.43e-22;21!UBERON:0003101;1.55e-21;22!UBERON:0000079;1.55e-21;22!UBERON:0002323;6.65e-12;45!UBERON:0003133;6.67e-08;44!UBERON:0002553;6.70e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.95e-59,8;UBERON:0003135,3.21e-43,11;UBERON:0000991,1.40e-22,21;UBERON:0009196,1.40e-22,21;UBERON:0009117,1.40e-22,21;UBERON:0005564,1.40e-22,21;UBERON:0004176,1.52e-21,22;UBERON:0003101,1.52e-21,22;UBERON:0000079,1.52e-21,22;UBERON:0002323,1.07e-13,46;UBERON:0004458,7.93e-13,49;UBERON:0003886,1.37e-11,54;UBERON:0002553,3.39e-10,61;UBERON:0003133,9.96e-10,48;UBERON:0005156,7.52e-08,59;UBERON:0000990,7.52e-08,59 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,28.2259907697571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,0.265059536642971,0.464775771478074,0.725627385107593,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7428108081644,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0.23056390438806,0.628303510868405,0,0,0.0915975934018623,0,0,0,0,1.57916962432026,0.980312671588698,0.671286347903371,0.75901493089674,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,3.15196426687527,0,0,0,6.25238797961963,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0.482259445395058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,2.21875575573872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.203909198930495,0,0,0,0.470958557103084,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,11.1494680890065,1.1218771271618,4.80991329478009,3.95148067999833,7.0198111001865,67.1399266213601,107.98954445294,0.829169439458779,0,0,0,0,0,0.448527450322454,0,0.202117188958219,0,0,0,0,0,0,4.37582118098633,0,0,0,0,0,0,0,0 | ||
|short_description=p1@C5orf58 | |short_description=p1@C5orf58 | ||
}} | }} |
Latest revision as of 20:58, 16 September 2015
Short description: | p1@C5orf58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C5orf58_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 5bp_to_NM_001102609, uc003mal.2, uc010jjn.2_5end |
EntrezGene: | C5orf58 |
HGNC: | 37272 |
UniProt: | C9J3I9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.09e-30 | 7 |
germ cell | 2.09e-30 | 7 |
epithelial cell of gall bladder | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.95e-59 | 8 |
male reproductive organ | 3.21e-43 | 11 |
gonad | 1.40e-22 | 21 |
indifferent external genitalia | 1.40e-22 | 21 |
indifferent gonad | 1.40e-22 | 21 |
gonad primordium | 1.40e-22 | 21 |
external genitalia | 1.52e-21 | 22 |
male organism | 1.52e-21 | 22 |
male reproductive system | 1.52e-21 | 22 |
body cavity | 1.07e-13 | 46 |
body cavity or lining | 7.93e-13 | 49 |
body cavity precursor | 1.37e-11 | 54 |
anatomical cavity | 3.39e-10 | 61 |
reproductive organ | 9.96e-10 | 48 |
reproductive structure | 7.52e-08 | 59 |
reproductive system | 7.52e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.51e-15 | 22 |
germ cell cancer | 4.51e-15 | 22 |
cell type cancer | 4.11e-08 | 143 |
carcinoma | 3.06e-07 | 106 |