FFCP PHASE1:Hg19::chr3:179280702..179280769,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=86 | |EntrezGene=86 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24124 | |HGNC=24124 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQT2,O96019 | |UniProt=C9JQT2,O96019 | ||
|association_with_transcript=0bp_to_ENST00000392662,ENST00000463661,ENST00000468767,ENST00000490364,ENST00000491202,ENST00000494843,NM_004301,NM_177989,NM_178042,uc003fjw.2,uc003fjx.2,uc003fjy.2_5end | |association_with_transcript=0bp_to_ENST00000392662,ENST00000463661,ENST00000468767,ENST00000490364,ENST00000491202,ENST00000494843,NM_004301,NM_177989,NM_178042,uc003fjw.2,uc003fjx.2,uc003fjy.2_5end | ||
|cluster_id=chr3:179280702..179280769,+ | |||
|coexpression_cluster_id=C1868 | |||
|description=CAGE_peak_1_at_ACTL6A_5end | |description=CAGE_peak_1_at_ACTL6A_5end | ||
|id=chr3:179280702..179280769,+ | |id=chr3:179280702..179280769,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.49e-20!254;CL:0000548!8.46e-13!679;CL:0000004!8.46e-13!679;CL:0000255!8.46e-13!679;CL:0000012!1.82e-12!682;CL:0000003!9.48e-08!722;CL:0000063!1.19e-07!578;CL:0000076!1.76e-07!62 | |ontology_enrichment_celltype=CL:0000066!9.49e-20!254;CL:0000548!8.46e-13!679;CL:0000004!8.46e-13!679;CL:0000255!8.46e-13!679;CL:0000012!1.82e-12!682;CL:0000003!9.48e-08!722;CL:0000063!1.19e-07!578;CL:0000076!1.76e-07!62 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.71e-20,253;CL:0000076,3.62e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.18e-65!235;DOID:14566!7.02e-62!239;DOID:0050687!2.94e-36!143;DOID:305!1.42e-32!106;DOID:0050686!4.02e-31!137;DOID:2531!2.61e-19!51;DOID:0060083!2.61e-19!51;DOID:1240!5.79e-17!39;DOID:8692!1.09e-13!31;DOID:7!2.18e-09!39;DOID:299!4.65e-08!25;DOID:1749!1.14e-07!14 | |ontology_enrichment_disease=DOID:162!7.18e-65!235;DOID:14566!7.02e-62!239;DOID:0050687!2.94e-36!143;DOID:305!1.42e-32!106;DOID:0050686!4.02e-31!137;DOID:2531!2.61e-19!51;DOID:0060083!2.61e-19!51;DOID:1240!5.79e-17!39;DOID:8692!1.09e-13!31;DOID:7!2.18e-09!39;DOID:299!4.65e-08!25;DOID:1749!1.14e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.12e-13;39!DOID:8692;2.08e-13;31!DOID:2531;2.40e-12;51!DOID:0060083;2.40e-12;51!DOID:305;5.82e-10;106!DOID:0050687;1.43e-08;143!DOID:14566;4.13e-08;239!DOID:162;4.20e-08;235!DOID:299;4.81e-08;25!DOID:1749;1.13e-07;14!DOID:7;1.30e-07;39!DOID:0050686;2.11e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.18e-65,235;DOID:14566,7.02e-62,239;DOID:0050687,2.94e-36,143;DOID:305,1.42e-32,106;DOID:0050686,4.02e-31,137;DOID:2531,2.61e-19,51;DOID:0060083,2.61e-19,51;DOID:1240,5.79e-17,39;DOID:8692,1.09e-13,31;DOID:7,2.18e-09,39;DOID:299,4.65e-08,25;DOID:1749,1.14e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@ACTL6A | |short_description=p1@ACTL6A | ||
}} | }} |
Latest revision as of 21:01, 16 September 2015
Short description: | p1@ACTL6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACTL6A_5end |
Coexpression cluster: | C1868_hereditary_teratocarcinoma_adrenal_epitheloid_large_acantholytic_Reticulocytes |
Association with transcript: | 0bp_to_ENST00000392662, ENST00000463661, ENST00000468767, ENST00000490364, ENST00000491202, ENST00000494843, NM_004301, NM_177989, NM_178042, uc003fjw.2, uc003fjx.2, uc003fjy.2_5end |
EntrezGene: | ACTL6A |
HGNC: | 24124 |
UniProt: | C9JQT2O96019 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.71e-20 | 253 |
squamous epithelial cell | 3.62e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.18e-65 | 235 |
disease of cellular proliferation | 7.02e-62 | 239 |
cell type cancer | 2.94e-36 | 143 |
carcinoma | 1.42e-32 | 106 |
organ system cancer | 4.02e-31 | 137 |
hematologic cancer | 2.61e-19 | 51 |
immune system cancer | 2.61e-19 | 51 |
leukemia | 5.79e-17 | 39 |
myeloid leukemia | 1.09e-13 | 31 |
disease of anatomical entity | 2.18e-09 | 39 |
adenocarcinoma | 4.65e-08 | 25 |
squamous cell carcinoma | 1.14e-07 | 14 |