FFCP PHASE2:Hg19::chr2:30670127..30670186,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:253558 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:26756 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=253558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=26756 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9K0C3,F8WEY2,A6H8Z7,Q6UWP7 | ||
|association_with_transcript=0bp_to_ENST00000476038,ENST00000478015,ENST00000540623,NM_001002257,uc002rnk.1,uc002rnl.2,uc010ymq.1_5end | |association_with_transcript=0bp_to_ENST00000476038,ENST00000478015,ENST00000540623,NM_001002257,uc002rnk.1,uc002rnl.2,uc010ymq.1_5end | ||
|cluster_id=chr2:30670127..30670186,+ | |cluster_id=chr2:30670127..30670186,+ |
Latest revision as of 22:03, 16 September 2015
Short description: | p2@LCLAT1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LCLAT1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_ENST00000476038, ENST00000478015, ENST00000540623, NM_001002257, uc002rnk.1, uc002rnl.2, uc010ymq.1_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | C9K0C3F8WEY2A6H8Z7Q6UWP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@LCLAT1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endodermal cell | 3.56e-07 | 58 |
skin fibroblast | 8.01e-07 | 23 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
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skin of body | 3.16e-09 | 41 |
digestive system | 3.09e-08 | 145 |
digestive tract | 3.09e-08 | 145 |
primitive gut | 3.09e-08 | 145 |
endoderm-derived structure | 2.69e-07 | 160 |
endoderm | 2.69e-07 | 160 |
presumptive endoderm | 2.69e-07 | 160 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
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cancer | 1.68e-32 | 235 |
disease of cellular proliferation | 2.70e-32 | 239 |
cell type cancer | 4.37e-22 | 143 |
carcinoma | 7.78e-21 | 106 |
organ system cancer | 1.05e-15 | 137 |
disease of anatomical entity | 2.20e-08 | 39 |
hematologic cancer | 4.51e-08 | 51 |
immune system cancer | 4.51e-08 | 51 |
Showing 1 to 8 of 8 entries