FFCP PHASE1:Hg19::chr2:31607381..31607392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7498 | |EntrezGene=7498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12805 | |HGNC=12805 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-120bp_to_ENST00000476043_5end | |association_with_transcript=-120bp_to_ENST00000476043_5end | ||
|cluster_id=chr2:31607381..31607392,- | |||
|description=CAGE_peak_4_at_XDH_5end | |description=CAGE_peak_4_at_XDH_5end | ||
|id=chr2:31607381..31607392,- | |id=chr2:31607381..31607392,- | ||
|ontology_enrichment_celltype=CL:0002076!5.66e-21!43;CL:0000066!6.39e-18!254;CL:0000223!2.44e-16!59;CL:0002251!3.14e-09!21;CL:0002149!5.64e-09!6;CL:0002255!5.64e-09!6;CL:0000622!3.57e-07!5;CL:0002621!4.50e-07!3 | |ontology_enrichment_celltype=CL:0002076!5.66e-21!43;CL:0000066!6.39e-18!254;CL:0000223!2.44e-16!59;CL:0002251!3.14e-09!21;CL:0002149!5.64e-09!6;CL:0002255!5.64e-09!6;CL:0000622!3.57e-07!5;CL:0002621!4.50e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002327;8.96e-23;4!CL:0002535;1.65e-12;2!CL:0002623;1.00e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.00e-22,4;CL:0002535,1.65e-12,2;CL:0002623,1.04e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.36e-15!14;DOID:305!6.21e-12!106;DOID:0050687!2.59e-09!143;DOID:3001!5.64e-09!6 | |ontology_enrichment_disease=DOID:1749!1.36e-15!14;DOID:305!6.21e-12!106;DOID:0050687!2.59e-09!143;DOID:3001!5.64e-09!6 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.07e-15;14!DOID:3307;2.90e-12;2!DOID:4556;1.30e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.68e-15,14;DOID:3307,2.59e-12,2;DOID:4556,1.51e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.69e-10!95;UBERON:0003729!7.53e-10!5;UBERON:0000166!2.08e-09!21;UBERON:0000161!3.17e-09!35;UBERON:0005910!1.11e-08!6;UBERON:0004119!2.37e-08!169;UBERON:0000925!2.37e-08!169;UBERON:0006595!2.37e-08!169;UBERON:0003343!2.73e-08!4;UBERON:0004785!2.73e-08!4;UBERON:0000165!1.03e-07!28;UBERON:0000930!1.03e-07!28;UBERON:0000365!4.25e-07!5;UBERON:0001949!4.50e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;8.96e-23;4!UBERON:0006955;1.65e-12;2!UBERON:0004801;1.65e-12;2!UBERON:0003100;1.13e-07;41!UBERON:0002365;6.76e-07;31!UBERON:0002330;6.76e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.00e-22,4;UBERON:0005333,1.00e-22,4;UBERON:0008425,1.00e-22,4;UBERON:0005311,1.00e-22,4;UBERON:0006955,1.65e-12,2;UBERON:0004801,1.65e-12,2;UBERON:0000076,6.88e-12,8;UBERON:0003100,5.51e-09,41;UBERON:0002365,5.19e-07,31;UBERON:0002330,5.19e-07,31 | |||
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| ||
|short_description=p4@XDH | |short_description=p4@XDH | ||
}} | }} |
Latest revision as of 22:51, 16 September 2015
Short description: | p4@XDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_XDH_5end |
Coexpression cluster: | NA |
Association with transcript: | -120bp_to_ENST00000476043_5end |
EntrezGene: | XDH |
HGNC: | 12805 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.00e-22 | 4 |
epithelial cell of cervix | 1.65e-12 | 2 |
acinar cell of salivary gland | 1.04e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.00e-22 | 4 |
mammary bud | 1.00e-22 | 4 |
mammary ridge | 1.00e-22 | 4 |
mammary placode | 1.00e-22 | 4 |
uterine epithelium | 1.65e-12 | 2 |
cervix epithelium | 1.65e-12 | 2 |
external ectoderm | 6.88e-12 | 8 |
female organism | 5.51e-09 | 41 |
exocrine gland | 5.19e-07 | 31 |
exocrine system | 5.19e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.68e-15 | 14 |
teratoma | 2.59e-12 | 2 |
lung large cell carcinoma | 1.51e-08 | 3 |