FFCP PHASE1:Hg19::chr2:134179318..134179336,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344148 | |EntrezGene=344148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29847 | |HGNC=29847 | ||
|TSSclassifier=strong | |||
|UniProt=O14513 | |UniProt=O14513 | ||
|association_with_transcript=24bp_to_uc002tts.1_5end | |association_with_transcript=24bp_to_uc002tts.1_5end | ||
|cluster_id=chr2:134179318..134179336,- | |||
|description=CAGE_peak_6_at_NCKAP5_5end | |description=CAGE_peak_6_at_NCKAP5_5end | ||
|id=chr2:134179318..134179336,- | |id=chr2:134179318..134179336,- | ||
|ontology_enrichment_celltype=CL:0000945!8.64e-11!24;CL:0000826!8.64e-11!24 | |ontology_enrichment_celltype=CL:0000945!8.64e-11!24;CL:0000826!8.64e-11!24 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.11e-12;1!CL:0000167;1.75e-12;1!CL:0000164;1.75e-12;1!CL:0000502;1.75e-12;1!CL:0000172;1.75e-12;1!CL:0000173;1.75e-12;1!CL:0000945;1.39e-07;24!CL:0002253;9.27e-07;2 | |ontology_enrichment_celltype_v019=CL:0002553;1.11e-12;1!CL:0000167;1.75e-12;1!CL:0000164;1.75e-12;1!CL:0000502;1.75e-12;1!CL:0000172;1.75e-12;1!CL:0000173;1.75e-12;1!CL:0000945;1.39e-07;24!CL:0002253;9.27e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.11e-12,1;CL:0000167,2.20e-12,1;CL:0000164,2.20e-12,1;CL:0000502,2.20e-12,1;CL:0000172,2.20e-12,1;CL:0000173,2.20e-12,1;CL:0002351,2.20e-12,1;CL:0000945,1.32e-07,24;CL:0000826,1.32e-07,24;CL:0002253,9.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002351;1.75e-12;1 | |ontology_enrichment_development_v019=CL:0002351;1.75e-12;1 | ||
|ontology_enrichment_disease=DOID:3119!5.59e-08!14 | |ontology_enrichment_disease=DOID:3119!5.59e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:3119;7.77e-13;14!DOID:4430;1.75e-12;1 | |ontology_enrichment_disease_v019=DOID:3119;7.77e-13;14!DOID:4430;1.75e-12;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,7.65e-13,14;DOID:4430,2.20e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000160!8.59e-07!27 | |ontology_enrichment_uberon=UBERON:0000160!8.59e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.75e-12;1!UBERON:0006518;1.75e-12;1!UBERON:0008949;1.75e-12;1!UBERON:0000101;1.75e-12;1!UBERON:0002167;1.75e-12;1!UBERON:0002048;1.86e-08;22!UBERON:0000117;1.86e-08;22!UBERON:0000171;1.86e-08;22!UBERON:0000170;1.86e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0002171;1.75e-12;1!UBERON:0006518;1.75e-12;1!UBERON:0008949;1.75e-12;1!UBERON:0000101;1.75e-12;1!UBERON:0002167;1.75e-12;1!UBERON:0002048;1.86e-08;22!UBERON:0000117;1.86e-08;22!UBERON:0000171;1.86e-08;22!UBERON:0000170;1.86e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.75e-12,1;UBERON:0006518,1.75e-12,1;UBERON:0008949,1.75e-12,1;UBERON:0000101,1.75e-12,1;UBERON:0002167,1.75e-12,1;UBERON:0002048,1.84e-08,22;UBERON:0000117,1.84e-08,22;UBERON:0000171,1.84e-08,22;UBERON:0000170,1.84e-08,22;UBERON:0005597,1.84e-08,22;UBERON:0000118,1.84e-08,22 | |||
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| ||
|short_description=p6@NCKAP5 | |short_description=p6@NCKAP5 | ||
}} | }} |
Latest revision as of 00:47, 17 September 2015
Short description: | p6@NCKAP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NCKAP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_uc002tts.1_5end |
EntrezGene: | NCKAP5 |
HGNC: | 29847 |
UniProt: | O14513 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.11e-12 | 1 |
peptide hormone secreting cell | 2.20e-12 | 1 |
enteroendocrine cell | 2.20e-12 | 1 |
type D enteroendocrine cell | 2.20e-12 | 1 |
somatostatin secreting cell | 2.20e-12 | 1 |
pancreatic D cell | 2.20e-12 | 1 |
progenitor cell of endocrine pancreas | 2.20e-12 | 1 |
lymphocyte of B lineage | 1.32e-07 | 24 |
pro-B cell | 1.32e-07 | 24 |
epithelial cell of large intestine | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.75e-12 | 1 |
right lung lobe | 1.75e-12 | 1 |
lower lobe of lung | 1.75e-12 | 1 |
lobe of lung | 1.75e-12 | 1 |
right lung | 1.75e-12 | 1 |
lung | 1.84e-08 | 22 |
respiratory tube | 1.84e-08 | 22 |
respiration organ | 1.84e-08 | 22 |
pair of lungs | 1.84e-08 | 22 |
lung primordium | 1.84e-08 | 22 |
lung bud | 1.84e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.65e-13 | 14 |
somatostatinoma | 2.20e-12 | 1 |