FFCP PHASE1:Hg19::chr2:3622893..3622925,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:3622893..3622925,+ to FFCP PHASE1:Hg19::chr2:3622893..3622925,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6201 | |EntrezGene=6201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10440 | |HGNC=10440 | ||
|TSSclassifier=strong | |||
|UniProt=P62081,B5MCP9 | |UniProt=P62081,B5MCP9 | ||
|association_with_transcript=0bp_to_ENST00000403564,ENST00000407445,ENST00000462576_5end | |||
|cluster_id=chr2:3622893..3622925,+ | |||
|description=CAGE_peak_2_at_RPS7_5end | |||
|id=chr2:3622893..3622925,+ | |||
|ontology_enrichment_celltype=CL:0000012!6.58e-32!682;CL:0000548!2.19e-30!679;CL:0000004!2.19e-30!679;CL:0000255!2.19e-30!679;CL:0000003!5.91e-28!722;CL:0000063!1.59e-18!578;CL:0000144!4.41e-17!625;CL:0000542!6.59e-12!53;CL:0000051!6.59e-12!53;CL:0000838!1.81e-11!52;CL:0002371!1.38e-10!591;CL:0000034!5.61e-09!444;CL:0000723!6.51e-08!436;CL:0000048!1.20e-07!430;CL:0000066!3.23e-07!254;CL:0000219!8.00e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.27e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.59e-12,53;CL:0000051,6.59e-12,53;CL:0000838,1.81e-11,52;CL:0000034,2.66e-08,441;CL:0000066,2.44e-07,253;CL:0000723,2.74e-07,433;CL:0000048,4.89e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000051;3.27e-07;53 | |||
|ontology_enrichment_disease=DOID:162!4.80e-26!235;DOID:14566!6.00e-25!239;DOID:0050687!9.98e-15!143;DOID:0050686!2.47e-12!137;DOID:305!9.80e-12!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.80e-26,235;DOID:14566,6.00e-25,239;DOID:0050687,9.98e-15,143;DOID:0050686,2.47e-12,137;DOID:305,9.80e-12,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@RPS7 | |||
}} | }} |
Latest revision as of 00:49, 17 September 2015
Short description: | p2@RPS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPS7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000403564, ENST00000407445, ENST00000462576_5end |
EntrezGene: | RPS7 |
HGNC: | 10440 |
UniProt: | P62081B5MCP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.59e-12 | 53 |
common lymphoid progenitor | 6.59e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.81e-11 | 52 |
stem cell | 2.66e-08 | 441 |
epithelial cell | 2.44e-07 | 253 |
somatic stem cell | 2.74e-07 | 433 |
multi fate stem cell | 4.89e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.80e-26 | 235 |
disease of cellular proliferation | 6.00e-25 | 239 |
cell type cancer | 9.98e-15 | 143 |
organ system cancer | 2.47e-12 | 137 |
carcinoma | 9.80e-12 | 106 |