FFCP PHASE1:Hg19::chr10:129705078..129705092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5791 | |EntrezGene=5791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9669 | |HGNC=9669 | ||
|TSSclassifier=strong | |||
|UniProt=P23469,Q5VWH4,Q96P81 | |UniProt=P23469,Q5VWH4,Q96P81 | ||
|association_with_transcript=-232bp_to_ENST00000254667,NM_006504,uc001lkb.2,uc009yat.2_5end | |association_with_transcript=-232bp_to_ENST00000254667,NM_006504,uc001lkb.2,uc009yat.2_5end | ||
|cluster_id=chr10:129705078..129705092,+ | |||
|coexpression_cluster_id=C2987 | |||
|description=CAGE_peak_15_at_PTPRE_5end | |description=CAGE_peak_15_at_PTPRE_5end | ||
|id=chr10:129705078..129705092,+ | |id=chr10:129705078..129705092,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.19e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.07e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!9.70e-09!2;DOID:299!1.23e-08!25;DOID:4929!1.60e-08!2;DOID:305!1.84e-08!106 | |ontology_enrichment_disease=DOID:3493!9.70e-09!2;DOID:299!1.23e-08!25;DOID:4929!1.60e-08!2;DOID:305!1.84e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.05e-34;1!DOID:1357;3.05e-34;1!DOID:3493;7.05e-18;2!DOID:5409;1.12e-09;4!DOID:0050615;2.50e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.61e-34,1;DOID:1357,3.61e-34,1;DOID:3493,6.48e-18,2;DOID:5409,1.12e-09,4;DOID:0050615,2.55e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.14e-17!155;UBERON:0001555!3.14e-17!155;UBERON:0007026!3.14e-17!155;UBERON:0004119!2.21e-16!169;UBERON:0000925!2.21e-16!169;UBERON:0006595!2.21e-16!169;UBERON:0004921!3.81e-16!129;UBERON:0004185!3.81e-16!129;UBERON:0005409!2.45e-15!35;UBERON:0000160!1.26e-14!27;UBERON:0002294!1.03e-13!7;UBERON:0001173!1.03e-13!7;UBERON:0004912!1.03e-13!7;UBERON:0000077!8.47e-11!130;UBERON:0005911!9.70e-11!82;UBERON:0002048!4.06e-10!22;UBERON:0000117!4.06e-10!22;UBERON:0000171!4.06e-10!22;UBERON:0000170!4.06e-10!22;UBERON:0005597!4.06e-10!22;UBERON:0000118!4.06e-10!22;UBERON:0002394!1.29e-09!4;UBERON:0003928!1.29e-09!4;UBERON:0005178!2.65e-09!34;UBERON:0002224!2.65e-09!34;UBERON:0005181!5.54e-09!35;UBERON:0000059!9.03e-09!11;UBERON:0005153!1.59e-08!37;UBERON:0001041!3.09e-08!98;UBERON:0000065!9.75e-08!53;UBERON:0004907!1.83e-07!5;UBERON:0001004!3.29e-07!72;UBERON:0001155!3.78e-07!9;UBERON:0005157!6.75e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.05e-34;1!UBERON:0001825;3.05e-34;1!UBERON:0005409;1.20e-13;22!UBERON:0004921;1.39e-09;33!UBERON:0000160;2.65e-08;17!UBERON:0000945;5.92e-08;5!UBERON:0010039;5.92e-08;5!UBERON:0002108;6.55e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.61e-34,1;UBERON:0001825,3.61e-34,1;UBERON:0005409,3.51e-12,25;UBERON:0000160,2.61e-08,17;UBERON:0002108,6.55e-08,4 | |||
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| ||
|short_description=p15@PTPRE | |short_description=p15@PTPRE | ||
}} | }} |
Latest revision as of 01:28, 17 September 2015
Short description: | p15@PTPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PTPRE_5end |
Coexpression cluster: | C2987_small_maxillary_signet_gall_neuroectodermal_neuroepithelioma_acute |
Association with transcript: | -232bp_to_ENST00000254667, NM_006504, uc001lkb.2, uc009yat.2_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | P23469Q5VWH4Q96P81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.07e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.61e-34 | 1 |
paranasal sinus | 3.61e-34 | 1 |
gastrointestinal system | 3.51e-12 | 25 |
intestine | 2.61e-08 | 17 |
small intestine | 6.55e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.61e-34 | 1 |
maxillary sinus cancer | 3.61e-34 | 1 |
signet ring cell adenocarcinoma | 6.48e-18 | 2 |
lung small cell carcinoma | 1.12e-09 | 4 |
respiratory system cancer | 2.55e-09 | 16 |