FFCP PHASE1:Hg19::chr3:185270305..185270319,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200879 | |EntrezGene=200879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18483 | |HGNC=18483 | ||
|TSSclassifier=strong | |||
|UniProt=F8WE09 | |UniProt=F8WE09 | ||
|association_with_transcript=-7bp_to_ENST00000429510_5end | |association_with_transcript=-7bp_to_ENST00000429510_5end | ||
|cluster_id=chr3:185270305..185270319,- | |||
|coexpression_cluster_id=C4309 | |||
|description=CAGE_peak_5_at_LIPH_5end | |description=CAGE_peak_5_at_LIPH_5end | ||
|id=chr3:185270305..185270319,- | |id=chr3:185270305..185270319,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000415;8.49e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.04e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0001041;5.85e-07;30 | |||
|ontology_enrichment_disease=DOID:305!5.47e-14!106;DOID:0050687!2.16e-08!143;DOID:1749!4.46e-08!14;DOID:299!6.07e-08!25 | |ontology_enrichment_disease=DOID:305!5.47e-14!106;DOID:0050687!2.16e-08!143;DOID:1749!4.46e-08!14;DOID:299!6.07e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:4929;1.68e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.38e-11!169;UBERON:0000925!1.38e-11!169;UBERON:0006595!1.38e-11!169;UBERON:0001007!4.65e-11!155;UBERON:0001555!4.65e-11!155;UBERON:0007026!4.65e-11!155;UBERON:0004921!6.87e-11!129;UBERON:0004185!6.87e-11!129;UBERON:0000077!2.74e-09!130;UBERON:0007023!3.19e-09!115;UBERON:0001041!1.17e-07!98;UBERON:0005911!1.26e-07!82;UBERON:0000481!2.61e-07!347;UBERON:0002294!3.71e-07!7;UBERON:0001173!3.71e-07!7;UBERON:0004912!3.71e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.12e-12;33!UBERON:0002294;1.80e-11;7!UBERON:0001173;1.80e-11;7!UBERON:0006562;2.13e-10;2!UBERON:0005409;2.16e-09;22!UBERON:0000160;5.00e-09;17!UBERON:0002110;1.80e-07;3!UBERON:0002048;2.41e-07;22!UBERON:0000117;2.41e-07;22!UBERON:0000171;2.41e-07;22!UBERON:0000170;2.41e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.01e-11,25;UBERON:0004921,2.61e-10,118;UBERON:0001007,8.76e-10,145;UBERON:0001555,8.76e-10,145;UBERON:0007026,8.76e-10,145;UBERON:0004119,1.70e-09,160;UBERON:0000925,1.70e-09,160;UBERON:0006595,1.70e-09,160;UBERON:0000160,3.78e-09,17;UBERON:0002294,7.14e-09,9;UBERON:0001173,7.14e-09,9;UBERON:0004912,7.14e-09,9;UBERON:0002110,2.06e-07,3;UBERON:0006242,2.06e-07,3;UBERON:0002048,2.79e-07,22;UBERON:0000117,2.79e-07,22;UBERON:0000171,2.79e-07,22;UBERON:0000170,2.79e-07,22;UBERON:0005597,2.79e-07,22;UBERON:0000118,2.79e-07,22;UBERON:0001041,8.97e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,1.29902789771517,1.23150884174919,1.02324015707783,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.460404944679482,0,0,0,0,0.385076685522074,0,1.46139224653261,0.73886140225013,0,0,0,0,0,0,1.01950509218015,0.831076008928724,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0.18532421910392,1.14499909393593,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.470719003883896,0.43050537267123,1.68471475667626,0,0.229723400206959,0,2.29391162142713,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0.270455678475983,0.99921590399346,0,0,0,0,0.334330152832435,0,2.14870036263921,0.296964680832639,1.53580351049616,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0.615424027305347,0,0.988551862620595,1.25314822272926,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0.910347586283997,0.254253650292766,1.18193840883968,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0.21787692703798,2.64905114129346,0.307801034015188,0,0.46112780877612,0,0,0,0,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0.489698424477443,0.706765357169704,0,1.99052386215701,0.265372693510018,1.22206028986725,0.296521128680622,0,0,0.134802265961354,0,0,0,0.391329237864179,0,0.394584402849391,2.41981432097328,0,0,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0.569219092059585,0,0.173559738335131,0.783939179315021,0.261177619741208,0,0,0.19351266257817,0.950161122120412,0.492692742319255,2.71569246167574,0,0,0,0,0.379864775735272,2.73771935828724,1.20238230377301,0.426905989478705,0,2.3054466744657,0,0,0.864328787928898,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,1.99679000498991,0,0,0,0,0,0,0,0,0.492137407573744,0.423366660328922,0,0,0.160753148465019,0,0,0,0.77380195455795,0.364497339948148,0,0.472834243795189,0.262272940674991,0.211200673038813,1.6135860539956,0.383830394638891,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,1.19760786519031,2.81926008926669,2.34932307648928,0.943225830597996,1.24271716604159,0,0.395223263795889,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0.887432412294818,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,1.51929978088691,0,0,0,0,0,0.491545817507439,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0.327543835020193,3.40068998299204,0.202612753855184,0,0.206686796501184,0.253663240775627,0,0.548257766857182,0,0,1.02209942111676,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0.118193840883968,0,0.156986185701028,0,1.68163297988273,0,0,0.47775168788705,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,3.90137359943262,0,0,0,1.45713297917742,0,0,0,0,0,0,1.23478652972711,0,1.41095188908457,0,0,0,0,0,0,0,0,10.4938213721175,0.892769693028288,0.352894871715692,0.882655033580851,0.730336388246517,1.83491713361816,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.303114792872958,0,0,0,2.13233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0.653150243690884,0,1.75115337837928,0.932388670104793,0.665320713092027,0,0,0,4.94038611586228,0,0,0.406896178315738,0,0.201273793591026,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,1.29902789771517,1.23150884174919,1.02324015707783,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.460404944679482,0,0,0,0,0.385076685522074,0,1.46139224653261,0.73886140225013,0,0,0,0,0,0,1.01950509218015,0.831076008928724,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0.18532421910392,1.14499909393593,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.470719003883896,0.43050537267123,1.68471475667626,0,0.229723400206959,0,2.29391162142713,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0.270455678475983,0.99921590399346,0,0,0,0,0.334330152832435,0,2.14870036263921,0.296964680832639,1.53580351049616,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0.615424027305347,0,0.988551862620595,1.25314822272926,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0.910347586283997,0.254253650292766,1.18193840883968,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0.21787692703798,2.64905114129346,0.307801034015188,0,0.46112780877612,0,0,0,0,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0.489698424477443,0.706765357169704,0,1.99052386215701,0.265372693510018,1.22206028986725,0.296521128680622,0,0,0.134802265961354,0,0,0,0.391329237864179,0,0.394584402849391,2.41981432097328,0,0,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0.569219092059585,0,0.173559738335131,0.783939179315021,0.261177619741208,0,0,0.19351266257817,0.950161122120412,0.492692742319255,2.71569246167574,0,0,0,0,0.379864775735272,2.73771935828724,1.20238230377301,0.426905989478705,0,2.3054466744657,0,0,0.864328787928898,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,1.99679000498991,0,0,0,0,0,0,0,0,0.492137407573744,0.423366660328922,0,0,0.160753148465019,0,0,0,0.77380195455795,0.364497339948148,0,0.472834243795189,0.262272940674991,0.211200673038813,1.6135860539956,0.383830394638891,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,1.19760786519031,2.81926008926669,2.34932307648928,0.943225830597996,1.24271716604159,0,0.395223263795889,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0.887432412294818,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,1.51929978088691,0,0,0,0,0,0.491545817507439,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0.327543835020193,3.40068998299204,0.202612753855184,0,0.206686796501184,0.253663240775627,0,0.548257766857182,0,0,1.02209942111676,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0.118193840883968,0,0.156986185701028,0,1.68163297988273,0,0,0.47775168788705,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,3.90137359943262,0,0,0,1.45713297917742,0,0,0,0,0,0,1.23478652972711,0,1.41095188908457,0,0,0,0,0,0,0,0,10.4938213721175,0.892769693028288,0.352894871715692,0.882655033580851,0.730336388246517,1.83491713361816,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.303114792872958,0,0,0,2.13233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0.653150243690884,0,1.75115337837928,0.932388670104793,0.665320713092027,0,0,0,4.94038611586228,0,0,0.406896178315738,0,0.201273793591026,1.28227396921293 | ||
|short_description=p5@LIPH | |short_description=p5@LIPH | ||
}} | }} |
Latest revision as of 03:47, 17 September 2015
Short description: | p5@LIPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LIPH_5end |
Coexpression cluster: | C4309_splenic_tubular_lung_signet_Intestinal_gall_throat |
Association with transcript: | -7bp_to_ENST00000429510_5end |
EntrezGene: | LIPH |
HGNC: | 18483 |
UniProt: | F8WE09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.04e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.01e-11 | 25 |
subdivision of digestive tract | 2.61e-10 | 118 |
digestive system | 8.76e-10 | 145 |
digestive tract | 8.76e-10 | 145 |
primitive gut | 8.76e-10 | 145 |
endoderm-derived structure | 1.70e-09 | 160 |
endoderm | 1.70e-09 | 160 |
presumptive endoderm | 1.70e-09 | 160 |
intestine | 3.78e-09 | 17 |
biliary system | 7.14e-09 | 9 |
biliary tree | 7.14e-09 | 9 |
biliary bud | 7.14e-09 | 9 |
gallbladder | 2.06e-07 | 3 |
gall bladder primordium | 2.06e-07 | 3 |
lung | 2.79e-07 | 22 |
respiratory tube | 2.79e-07 | 22 |
respiration organ | 2.79e-07 | 22 |
pair of lungs | 2.79e-07 | 22 |
lung primordium | 2.79e-07 | 22 |
lung bud | 2.79e-07 | 22 |
foregut | 8.97e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.73e-11 | 2 |