FFCP PHASE1:Hg19::chr16:57513657..57513683,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55715 | |EntrezGene=55715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19868 | |HGNC=19868 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TEW6 | |UniProt=Q8TEW6 | ||
|association_with_transcript=33bp_to_uc002elu.1,uc010cdb.2_5end | |association_with_transcript=33bp_to_uc002elu.1,uc010cdb.2_5end | ||
|cluster_id=chr16:57513657..57513683,- | |||
|description=CAGE_peak_2_at_DOK4_5end | |description=CAGE_peak_2_at_DOK4_5end | ||
|id=chr16:57513657..57513683,- | |id=chr16:57513657..57513683,- | ||
|ontology_enrichment_celltype=CL:0000055!1.70e-16!180;CL:0000071!1.47e-12!18;CL:0002546!1.47e-12!18;CL:0002139!6.73e-12!24;CL:0000222!1.15e-11!119;CL:0000115!8.64e-10!35;CL:0002078!5.16e-09!44;CL:0000213!1.45e-08!57;CL:0000215!1.45e-08!57;CL:0000057!6.54e-08!75;CL:0002321!9.62e-08!248;CL:0000220!1.12e-07!246 | |ontology_enrichment_celltype=CL:0000055!1.70e-16!180;CL:0000071!1.47e-12!18;CL:0002546!1.47e-12!18;CL:0002139!6.73e-12!24;CL:0000222!1.15e-11!119;CL:0000115!8.64e-10!35;CL:0002078!5.16e-09!44;CL:0000213!1.45e-08!57;CL:0000215!1.45e-08!57;CL:0000057!6.54e-08!75;CL:0002321!9.62e-08!248;CL:0000220!1.12e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000071;1.74e-22;18!CL:0002139;1.50e-20;24!CL:0000115;1.35e-14;36!CL:0002543;1.47e-11;6!CL:0002078;9.09e-11;45!CL:0000213;5.93e-09;58!CL:0000215;5.93e-09;58!CL:1000413;3.36e-08;9!CL:0002144;7.49e-07;3!CL:0002618;9.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,4.18e-23,18;CL:0002546,4.18e-23,18;CL:0002139,6.05e-21,24;CL:0000115,2.00e-19,36;CL:0002078,8.65e-16,45;CL:0000213,3.00e-13,58;CL:0000215,3.00e-13,58;CL:0002543,2.99e-12,6;CL:0000222,8.68e-10,121;CL:1000413,2.85e-08,9;CL:0002618,5.83e-07,3;CL:0002144,8.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.74e-22;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.49e-17!312;UBERON:0000477!9.41e-17!286;UBERON:0000483!1.85e-16!309;UBERON:0002049!7.64e-15!79;UBERON:0007798!7.64e-15!79;UBERON:0004111!8.19e-15!241;UBERON:0000475!1.65e-14!365;UBERON:0000025!1.98e-14!194;UBERON:0000468!4.23e-13!659;UBERON:0000055!1.19e-12!69;UBERON:0001986!1.47e-12!18;UBERON:0004638!1.47e-12!18;UBERON:0004852!1.47e-12!18;UBERON:0004872!1.96e-12!84;UBERON:0000481!4.45e-12!347;UBERON:0001981!4.98e-12!60;UBERON:0007500!4.98e-12!60;UBERON:0004537!4.98e-12!60;UBERON:0006965!4.98e-12!60;UBERON:0006914!2.52e-11!25;UBERON:0000467!3.95e-11!625;UBERON:0000487!4.46e-11!22;UBERON:0000480!5.83e-11!626;UBERON:0001009!1.90e-10!113;UBERON:0003914!2.35e-10!118;UBERON:0004121!2.42e-10!169;UBERON:0000922!4.68e-10!612;UBERON:0000073!6.59e-10!94;UBERON:0001016!6.59e-10!94;UBERON:0004535!6.93e-10!110;UBERON:0005743!8.29e-10!86;UBERON:0000924!1.29e-09!173;UBERON:0006601!1.29e-09!173;UBERON:0001017!1.74e-09!82;UBERON:0002050!3.32e-09!605;UBERON:0005423!3.32e-09!605;UBERON:0000923!7.04e-09!604;UBERON:0005291!7.04e-09!604;UBERON:0006598!7.04e-09!604;UBERON:0002532!7.04e-09!604;UBERON:0000033!1.16e-08!123;UBERON:0000153!1.75e-08!129;UBERON:0007811!1.75e-08!129;UBERON:0000490!1.81e-08!138;UBERON:0003075!6.52e-08!86;UBERON:0007284!6.52e-08!86;UBERON:0003056!1.34e-07!61;UBERON:0002346!5.01e-07!90;UBERON:0000955!6.34e-07!69;UBERON:0006238!6.34e-07!69;UBERON:0000064!6.64e-07!219;UBERON:0003080!8.17e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.74e-22;18!UBERON:0001986;1.74e-22;18!UBERON:0004852;1.74e-22;18!UBERON:0000487;5.30e-20;22!UBERON:0006914;2.92e-19;25!UBERON:0000490;6.14e-14;33!UBERON:0007500;7.81e-10;56!UBERON:0001981;7.81e-10;56!UBERON:0004537;7.81e-10;56!UBERON:0000055;1.08e-08;65!UBERON:0003915;3.36e-08;9!UBERON:0004700;3.36e-08;9!UBERON:0001917;3.36e-08;9!UBERON:0001638;2.10e-07;9!UBERON:0003920;2.10e-07;9!UBERON:0004582;2.10e-07;9!UBERON:0010523;7.49e-07;3!UBERON:0001915;7.49e-07;3!UBERON:0001982;7.49e-07;3!UBERON:0002049;8.07e-07;75!UBERON:0007798;8.07e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.18e-23,18;UBERON:0001986,4.18e-23,18;UBERON:0004852,4.18e-23,18;UBERON:0000487,1.08e-20,22;UBERON:0006914,6.99e-20,25;UBERON:0002049,1.35e-15,78;UBERON:0007798,1.35e-15,78;UBERON:0007500,1.84e-14,59;UBERON:0001981,1.84e-14,59;UBERON:0004537,1.84e-14,59;UBERON:0006965,1.84e-14,59;UBERON:0000055,5.83e-14,68;UBERON:0004872,4.92e-11,83;UBERON:0004535,1.84e-09,109;UBERON:0001009,5.46e-09,112;UBERON:0003915,2.85e-08,9;UBERON:0004700,2.85e-08,9;UBERON:0001917,2.85e-08,9;UBERON:0001638,7.66e-08,9;UBERON:0003920,7.66e-08,9;UBERON:0004582,7.66e-08,9;UBERON:0000490,1.56e-07,148;UBERON:0001637,4.26e-07,42;UBERON:0003509,4.26e-07,42;UBERON:0004572,4.26e-07,42;UBERON:0003914,6.71e-07,117;UBERON:0010523,8.47e-07,3;UBERON:0001915,8.47e-07,3;UBERON:0001982,8.47e-07,3 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.704772020479856,1.0007329835313,1.34088328328186,0.872338524100369,0,1.26343974685366,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,0.722878304769133,1.50401373190767,0,0,0.486634870302636,0.567208902984407,0,0.527008714158756,0.392937226493138,0.364295288292542,0.741568885568859,0,0,0,0,0,0,2.18638648103376,4.30117297553062,0.694281003215189,2.82653970962005,2.09749718104953,2.20094433552054,2.50793959844173,0,0,0.66944122552934,1.20848795132744,3.80136052859256,2.4406205754817,0.367663080345869,0.81014194788176,2.14319347881791,1.79623498100936,2.0270066486998,1.53316637465883,1.89853131913626,3.48083313467774,0,0,0,0,1.39293562831038,0.794455084879313,0,1.41867352879343,0.560677600142307,0,0.74000264525148,0.311211035399766,0.808264032418128,0.817309515567294,0.454072282934794,1.72852777344,0,1.87296046098192,1.1409436430889,1.19558944441441,0.117434498643765,0.323745888736263,0.140450806702248,1.42907919878425,1.35117749042945,0.619954687054593,1.18800285728205,0.741800787835671,0.910161361938026,0.718618141816238,0.168336113954066,0.625592599359821,1.38532057742091,0.438977620880838,0.612975591598039,0.300476117813194,1.13432183160021,0.358779271377724,0,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.487185025805993,0,0.276149695926898,0,0.355009592516614,0,0.508681776931463,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.414644220061482,0.756962552626885,0.36497735907583,1.56449532329816,0.643240938192885,0,1.39310378409594,0.721879481669586,0.118306800039844,0,0,0.220587945464788,0,0,0,0,0,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0.185176890317059,0,0,1.44331342025273,0,0.352226082707465,1.15493158208859,0.462985512576611,2.09279567458058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,0.763976851116555,0,1.71072446022705,0.308482478109971,0.600686115687835,0.285826432630578,0.448524337381443,0.43596006883328,1.39342743059805,0.129271715757778,0,0.845302752556,0.531876233169741,1.04007436911366,0.771622122786426,0,1.3321108950805,0.142977993658148,0.542621605391443,1.64648067356154,0.977208552881205,1.06617584622764,1.58390374586686,0.904318131178758,0,0.599837947092342,0,0,0,0,0,0,1.15825045334063,1.02738161275192,1.07436577943937,0,0,0,0,1.01637849688985,3.90419561572865,2.31986643833309,2.01019518401218,1.91381625495949,0,0,0,0.36807447515742,0,0,0.207970861530807,1.24900292158013,0.630809660135739,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0.921845842708516,0.60818530127658,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.512556597022804,0,0.64341568457443,0,1.3878872442239,1.24293207719189,0.739144404124282,0,0.929683027679674,0.362578348774867,0,0,0.574072240823034,0.546273504020151,0.262248829918848,0,0.308061348417659,0,0,0.316654886678627,0,0.680374821106063,0.647747748306418,3.08454505380579,0.812839312631559,1.00337954770971,0.254876273045038,0,0.895499018888713,0,0,0,0.656029291399411,0.650756789328606,0.412164046590889,4.2121953816438,4.04296549610881,0,0,1.6068392984416,0.386682873168488,0.308097234229289,0.460511024178389,0.275673144969061,0.644521469209642,0.725083469571143,0.596586391912706,0.712256285173899,0,0,0,0,0,0,2.0911118104818,0.924100740528266,0.532306030317022,0,0.18532421910392,0,1.116475108079,0.632758849437452,0,0,0.855877976067841,0,0,0.179872457583315,0.274537029736055,0.471249609382746,2.42618977887979,1.58510321173008,0,0.48763373908959,1.46228093778771,0,0.272999822815972,0.565621727814851,1.13008116620243,3.85955740482287,0,0.438450885253763,0.578775534266688,0.655894752046633,0.811641507850816,0.6196469961995,0.281695602532241,0.573645408816206,0.196498082026242,0.7133421029625,0,1.26664581178598,0.329294892959902,1.51789269506286,1.04980416073495,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.703347082052564,0,0,0,0.597743964753209,0,0.503865495708552,0,0,0.622079175323615,0,0,0,0,0,3.33410970433911,0.969332746095218,0.371072392647405,5.98841394003583,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.694499979733169,0,0.60298219312704,0,1.3269511191747,0,0.87754158861589,0.10893846351899,0,0.538651809526579,0,0,0,0,0,0.641183153813036,0,0,1.0988617947651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| ||
|short_description=p2@DOK4 | |short_description=p2@DOK4 | ||
}} | }} |
Latest revision as of 04:00, 17 September 2015
Short description: | p2@DOK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DOK4_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_uc002elu.1, uc010cdb.2_5end |
EntrezGene: | DOK4 |
HGNC: | 19868 |
UniProt: | Q8TEW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 4.18e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.18e-23 | 18 |
endothelial cell of vascular tree | 6.05e-21 | 24 |
endothelial cell | 2.00e-19 | 36 |
meso-epithelial cell | 8.65e-16 | 45 |
lining cell | 3.00e-13 | 58 |
barrier cell | 3.00e-13 | 58 |
vein endothelial cell | 2.99e-12 | 6 |
mesodermal cell | 8.68e-10 | 121 |
endothelial cell of artery | 2.85e-08 | 9 |
endothelial cell of umbilical vein | 5.83e-07 | 3 |
capillary endothelial cell | 8.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.18e-23 | 18 |
endothelium | 4.18e-23 | 18 |
cardiovascular system endothelium | 4.18e-23 | 18 |
simple squamous epithelium | 1.08e-20 | 22 |
squamous epithelium | 6.99e-20 | 25 |
vasculature | 1.35e-15 | 78 |
vascular system | 1.35e-15 | 78 |
epithelial tube open at both ends | 1.84e-14 | 59 |
blood vessel | 1.84e-14 | 59 |
blood vasculature | 1.84e-14 | 59 |
vascular cord | 1.84e-14 | 59 |
vessel | 5.83e-14 | 68 |
splanchnic layer of lateral plate mesoderm | 4.92e-11 | 83 |
cardiovascular system | 1.84e-09 | 109 |
circulatory system | 5.46e-09 | 112 |
endothelial tube | 2.85e-08 | 9 |
arterial system endothelium | 2.85e-08 | 9 |
endothelium of artery | 2.85e-08 | 9 |
vein | 7.66e-08 | 9 |
venous blood vessel | 7.66e-08 | 9 |
venous system | 7.66e-08 | 9 |
unilaminar epithelium | 1.56e-07 | 148 |
artery | 4.26e-07 | 42 |
arterial blood vessel | 4.26e-07 | 42 |
arterial system | 4.26e-07 | 42 |
epithelial tube | 6.71e-07 | 117 |
microcirculatory vessel | 8.47e-07 | 3 |
endothelium of capillary | 8.47e-07 | 3 |
capillary | 8.47e-07 | 3 |