FFCP PHASE1:Hg19::chr2:139259390..139259401,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339745 | |EntrezGene=339745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27934 | |HGNC=27934 | ||
|TSSclassifier=strong | |||
|UniProt=Q6IQ16 | |UniProt=Q6IQ16 | ||
|association_with_transcript=19bp_to_ENST00000280098_5end | |association_with_transcript=19bp_to_ENST00000280098_5end | ||
|cluster_id=chr2:139259390..139259401,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_5_at_SPOPL_5end | |description=CAGE_peak_5_at_SPOPL_5end |
Latest revision as of 04:08, 17 September 2015
Short description: | p5@SPOPL |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPOPL_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 19bp_to_ENST00000280098_5end |
EntrezGene: | SPOPL |
HGNC: | 27934 |
UniProt: | Q6IQ16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@SPOPL |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.38e-34 | 136 |
classical monocyte | 1.31e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-31 | 42 |
myeloid leukocyte | 2.48e-31 | 72 |
hematopoietic stem cell | 2.97e-27 | 168 |
defensive cell | 5.61e-27 | 48 |
phagocyte | 5.61e-27 | 48 |
hematopoietic oligopotent progenitor cell | 1.42e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-25 | 161 |
hematopoietic cell | 2.28e-25 | 177 |
Showing 1 to 10 of 29 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.13e-16 | 98 |
blood island | 6.13e-16 | 98 |
bone marrow | 8.08e-15 | 76 |
hemolymphoid system | 6.56e-14 | 108 |
bone element | 2.24e-13 | 82 |
skeletal element | 9.36e-12 | 90 |
immune system | 3.21e-11 | 93 |
skeletal system | 4.23e-10 | 100 |
connective tissue | 2.72e-08 | 371 |
Showing 1 to 9 of 9 entries