FFCP PHASE1:Hg19::chr3:185542817..185542841,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10644 | |EntrezGene=10644 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28867 | |HGNC=28867 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6M1 | |UniProt=Q9Y6M1 | ||
|association_with_transcript=0bp_to_NM_001007225,NM_006548,uc003fpo.2,uc003fpp.2,uc003fpq.2_5end | |association_with_transcript=0bp_to_NM_001007225,NM_006548,uc003fpo.2,uc003fpp.2,uc003fpq.2_5end | ||
|cluster_id=chr3:185542817..185542841,- | |||
|description=CAGE_peak_2_at_IGF2BP2_5end | |description=CAGE_peak_2_at_IGF2BP2_5end | ||
|id=chr3:185542817..185542841,- | |id=chr3:185542817..185542841,- | ||
|ontology_enrichment_celltype=CL:0000066!1.54e-18!254;CL:0002321!1.01e-17!248;CL:0000220!6.21e-17!246;CL:0000012!6.74e-15!682;CL:0000548!1.37e-14!679;CL:0000004!1.37e-14!679;CL:0000255!1.37e-14!679;CL:0000055!7.41e-13!180;CL:0000144!9.39e-10!625;CL:0000057!8.11e-09!75;CL:0000223!1.06e-07!59;CL:0000222!6.40e-07!119;CL:0002371!6.65e-07!591;CL:0002076!9.44e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.54e-18!254;CL:0002321!1.01e-17!248;CL:0000220!6.21e-17!246;CL:0000012!6.74e-15!682;CL:0000548!1.37e-14!679;CL:0000004!1.37e-14!679;CL:0000255!1.37e-14!679;CL:0000055!7.41e-13!180;CL:0000144!9.39e-10!625;CL:0000057!8.11e-09!75;CL:0000223!1.06e-07!59;CL:0000222!6.40e-07!119;CL:0002371!6.65e-07!591;CL:0002076!9.44e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.08e-18,250;CL:0000066,1.21e-17,253;CL:0000057,4.16e-09,76;CL:0000223,1.92e-07,58;CL:0000222,2.54e-07,121;CL:0000076,6.48e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.95e-07!143 | |ontology_enrichment_disease=DOID:0050687!3.95e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.89e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.08e-11!659;UBERON:0004119!1.05e-10!169;UBERON:0000925!1.05e-10!169;UBERON:0006595!1.05e-10!169;UBERON:0005256!1.15e-10!143;UBERON:0002100!1.66e-10!216;UBERON:0003104!2.08e-10!238;UBERON:0009142!2.08e-10!238;UBERON:0003102!1.16e-09!95;UBERON:0000467!3.38e-09!625;UBERON:0000480!4.88e-09!626;UBERON:0001444!9.19e-09!48;UBERON:0001007!2.33e-08!155;UBERON:0001555!2.33e-08!155;UBERON:0007026!2.33e-08!155;UBERON:0000481!2.88e-08!347;UBERON:0000466!4.36e-08!126;UBERON:0000475!9.24e-08!365;UBERON:0000490!1.03e-07!138;UBERON:0000922!1.10e-07!612;UBERON:0005177!6.28e-07!107 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.78e-10,160;UBERON:0009142,2.78e-10,160;UBERON:0003102,3.49e-10,99;UBERON:0000490,1.12e-09,148;UBERON:0002100,4.22e-09,199;UBERON:0004119,1.24e-08,160;UBERON:0000925,1.24e-08,160;UBERON:0006595,1.24e-08,160;UBERON:0001444,3.36e-08,49;UBERON:0000033,6.33e-08,56;UBERON:0005256,7.46e-08,122;UBERON:0005177,5.29e-07,101 | |||
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| ||
|short_description=p2@IGF2BP2 | |short_description=p2@IGF2BP2 | ||
}} | }} |
Latest revision as of 04:08, 17 September 2015
Short description: | p2@IGF2BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IGF2BP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001007225, NM_006548, uc003fpo.2, uc003fpp.2, uc003fpq.2_5end |
EntrezGene: | IGF2BP2 |
HGNC: | 28867 |
UniProt: | Q9Y6M1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.08e-18 | 250 |
epithelial cell | 1.21e-17 | 253 |
fibroblast | 4.16e-09 | 76 |
endodermal cell | 1.92e-07 | 58 |
mesodermal cell | 2.54e-07 | 121 |
squamous epithelial cell | 6.48e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.78e-10 | 160 |
entire embryonic mesenchyme | 2.78e-10 | 160 |
surface structure | 3.49e-10 | 99 |
unilaminar epithelium | 1.12e-09 | 148 |
trunk | 4.22e-09 | 199 |
endoderm-derived structure | 1.24e-08 | 160 |
endoderm | 1.24e-08 | 160 |
presumptive endoderm | 1.24e-08 | 160 |
subdivision of head | 3.36e-08 | 49 |
head | 6.33e-08 | 56 |
trunk mesenchyme | 7.46e-08 | 122 |
trunk region element | 5.29e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.89e-07 | 143 |