FFCP PHASE1:Hg19::chr6:22303034..22303053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5617 | |EntrezGene=5617 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9445 | |HGNC=9445 | ||
|TSSclassifier=strong | |||
|UniProt=P01236,Q5THQ0 | |UniProt=P01236,Q5THQ0 | ||
|association_with_transcript=28bp_to_NM_001163558,uc003ndq.2,uc003ndr.1_5end | |association_with_transcript=28bp_to_NM_001163558,uc003ndq.2,uc003ndr.1_5end | ||
|cluster_id=chr6:22303034..22303053,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_4_at_PRL_5end | |description=CAGE_peak_4_at_PRL_5end | ||
|id=chr6:22303034..22303053,- | |id=chr6:22303034..22303053,- | ||
|ontology_enrichment_celltype=CL:0002541!5.46e-11!3;CL:0002580!6.60e-10!3;CL:0002617!9.58e-08!2;CL:0000136!1.84e-07!15 | |ontology_enrichment_celltype=CL:0002541!5.46e-11!3;CL:0002580!6.60e-10!3;CL:0002617!9.58e-08!2;CL:0000136!1.84e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.41e-29;3!CL:0000136;9.09e-26;13!CL:0002617;6.23e-20;2!CL:0002615;1.65e-13;3!CL:0002616;1.27e-10;1!CL:0000349;2.47e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.48e-29,3;CL:0000136,2.58e-22,15;CL:0002617,6.54e-20,2;CL:0002615,1.60e-13,3;CL:0002616,1.10e-10,1;CL:0000349,2.40e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.53e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!5.46e-11!3;UBERON:0000920!5.46e-11!3;UBERON:0003688!9.72e-09!6;UBERON:0002358!9.72e-09!6;UBERON:0003684!9.72e-09!6;UBERON:0001178!9.72e-09!6;UBERON:0003124!4.56e-08!7;UBERON:0000310!8.82e-08!10;UBERON:0001443!4.89e-07!11 | |ontology_enrichment_uberon=UBERON:0000476!5.46e-11!3;UBERON:0000920!5.46e-11!3;UBERON:0003688!9.72e-09!6;UBERON:0002358!9.72e-09!6;UBERON:0003684!9.72e-09!6;UBERON:0001178!9.72e-09!6;UBERON:0003124!4.56e-08!7;UBERON:0000310!8.82e-08!10;UBERON:0001443!4.89e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.41e-29;3!UBERON:0000920;1.41e-29;3!UBERON:0002370;9.14e-20;2!UBERON:0005058;9.14e-20;2!UBERON:0009113;9.14e-20;2!UBERON:0003688;9.15e-15;6!UBERON:0002358;9.15e-15;6!UBERON:0003684;9.15e-15;6!UBERON:0001178;9.15e-15;6!UBERON:0004457;4.97e-10;9!UBERON:0000042;4.97e-10;9!UBERON:0000478;5.38e-10;24!UBERON:0005631;2.76e-09;10!UBERON:0000158;2.76e-09;10!UBERON:0004177;1.82e-08;5!UBERON:0005057;1.82e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.48e-29,3;UBERON:0003124,1.75e-22,7;UBERON:0003688,9.37e-15,6;UBERON:0002358,9.37e-15,6;UBERON:0003684,9.37e-15,6;UBERON:0001178,9.37e-15,6;UBERON:0005631,2.32e-11,14;UBERON:0000158,2.32e-11,14;UBERON:0002370,1.95e-10,4;UBERON:0005058,1.95e-10,4;UBERON:0009113,1.95e-10,4;UBERON:0003295,1.95e-10,4;UBERON:0005562,1.95e-10,4;UBERON:0000478,5.22e-10,24;UBERON:0004457,1.21e-07,12;UBERON:0000042,1.21e-07,12;UBERON:0003351,3.05e-07,6 | |||
|phase1_expression=3.08853244759946,1.2846031433459,1.83240725324762,2.00146596706261,0,1.74467704820074,7.59899634504932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600952235626387,0,0,0.427114777637135,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,1.17217447210047,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,2.71310802695722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.128139149255701,2.04682899626681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04900957073839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48332062874083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0.642352300414798,0,0,0,0,0,0,2.54004524022652,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.6490823409663,1.19076871422421,8.52855641629816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.951329442515298,0.209205692624666,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,1.07572403599707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,57.213028754902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,2.45437857376823,1.86224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611207220914332,0,0,0.402547587182052,0 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|phase1_expression=3.08853244759946,1.2846031433459,1.83240725324762,2.00146596706261,0,1.74467704820074,7.59899634504932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600952235626387,0,0,0.427114777637135,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,1.17217447210047,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,2.71310802695722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.128139149255701,2.04682899626681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04900957073839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48332062874083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0.642352300414798,0,0,0,0,0,0,2.54004524022652,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.6490823409663,1.19076871422421,8.52855641629816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.951329442515298,0.209205692624666,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,1.07572403599707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,57.213028754902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,2.45437857376823,1.86224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611207220914332,0,0,0.402547587182052,0 | ||
|short_description=p4@PRL | |short_description=p4@PRL | ||
}} | }} |
Latest revision as of 05:04, 17 September 2015
Short description: | p4@PRL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRL_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 28bp_to_NM_001163558, uc003ndq.2, uc003ndr.1_5end |
EntrezGene: | PRL |
HGNC: | 9445 |
UniProt: | P01236Q5THQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.48e-29 | 3 |
fat cell | 2.58e-22 | 15 |
adipocyte of breast | 6.54e-20 | 2 |
adipocyte of omentum tissue | 1.60e-13 | 3 |
perirenal adipocyte cell | 1.10e-10 | 1 |
extraembryonic cell | 2.40e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.48e-29 | 3 |
chorion | 1.75e-22 | 7 |
omentum | 9.37e-15 | 6 |
peritoneum | 9.37e-15 | 6 |
abdominal cavity | 9.37e-15 | 6 |
visceral peritoneum | 9.37e-15 | 6 |
extraembryonic membrane | 2.32e-11 | 14 |
membranous layer | 2.32e-11 | 14 |
thymus | 1.95e-10 | 4 |
hemolymphoid system gland | 1.95e-10 | 4 |
thymic region | 1.95e-10 | 4 |
pharyngeal gland | 1.95e-10 | 4 |
thymus primordium | 1.95e-10 | 4 |
extraembryonic structure | 5.22e-10 | 24 |
cavity lining | 1.21e-07 | 12 |
serous membrane | 1.21e-07 | 12 |
pharyngeal epithelium | 3.05e-07 | 6 |