FFCP PHASE1:Hg19::chr20:57090346..57090361,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=164284 | |EntrezGene=164284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26892 | |HGNC=26892 | ||
|TSSclassifier=strong | |||
|UniProt=A2A2P3 | |UniProt=A2A2P3 | ||
|association_with_transcript=-159bp_to_ENST00000425773_5end | |association_with_transcript=-159bp_to_ENST00000425773_5end | ||
|cluster_id=chr20:57090346..57090361,- | |||
|coexpression_cluster_id=C2622 | |||
|description=CAGE_peak_6_at_APCDD1L_5end | |description=CAGE_peak_6_at_APCDD1L_5end | ||
|id=chr20:57090346..57090361,- | |id=chr20:57090346..57090361,- | ||
|ontology_enrichment_celltype=CL:0000055!7.67e-26!180;CL:0000057!4.09e-16!75;CL:0000048!2.45e-15!430;CL:0000723!1.16e-14!436;CL:0000034!8.47e-14!444;CL:0002620!1.36e-12!23;CL:0000680!1.24e-09!57;CL:0000056!1.24e-09!57;CL:0000355!1.24e-09!57;CL:0000359!7.40e-09!32;CL:0002371!1.44e-08!591;CL:0000134!5.29e-08!358;CL:0000183!6.07e-08!59;CL:0000499!8.09e-08!27;CL:0000187!8.51e-08!54;CL:0002320!9.03e-08!365;CL:0002595!1.59e-07!5;CL:0000144!2.85e-07!625;CL:0000393!3.96e-07!60;CL:0000211!3.96e-07!60;CL:0000153!5.32e-07!9;CL:0000447!5.32e-07!9;CL:0000219!8.88e-07!390 | |ontology_enrichment_celltype=CL:0000055!7.67e-26!180;CL:0000057!4.09e-16!75;CL:0000048!2.45e-15!430;CL:0000723!1.16e-14!436;CL:0000034!8.47e-14!444;CL:0002620!1.36e-12!23;CL:0000680!1.24e-09!57;CL:0000056!1.24e-09!57;CL:0000355!1.24e-09!57;CL:0000359!7.40e-09!32;CL:0002371!1.44e-08!591;CL:0000134!5.29e-08!358;CL:0000183!6.07e-08!59;CL:0000499!8.09e-08!27;CL:0000187!8.51e-08!54;CL:0002320!9.03e-08!365;CL:0002595!1.59e-07!5;CL:0000144!2.85e-07!625;CL:0000393!3.96e-07!60;CL:0000211!3.96e-07!60;CL:0000153!5.32e-07!9;CL:0000447!5.32e-07!9;CL:0000219!8.88e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0002595;8.12e-13;5!CL:0002620;3.83e-08;23!CL:0000499;4.49e-08;28!CL:0000062;1.24e-07;9!CL:0000138;7.06e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,4.07e-13,5;CL:0000499,3.21e-08,28;CL:0002620,5.08e-08,23;CL:0000048,8.46e-08,427;CL:0000723,1.45e-07,433;CL:0000057,1.71e-07,76;CL:0000034,2.90e-07,441;CL:0000058,7.75e-07,6;CL:0000138,7.75e-07,6;CL:0000359,8.06e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.75e-09!14;DOID:120!6.23e-07!27 | |ontology_enrichment_disease=DOID:2394!6.75e-09!14;DOID:120!6.23e-07!27 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!2.83e-10!82;UBERON:0004290!3.42e-10!70;UBERON:0000914!5.15e-10!83;UBERON:0002329!5.15e-10!83;UBERON:0003077!5.15e-10!83;UBERON:0003059!5.15e-10!83;UBERON:0007282!5.15e-10!83;UBERON:0009618!5.15e-10!83;UBERON:0007285!5.15e-10!83;UBERON:0002385!1.05e-08!63;UBERON:0001015!1.05e-08!63;UBERON:0000383!1.05e-08!63;UBERON:0001134!1.69e-08!61;UBERON:0002036!1.69e-08!61;UBERON:0003082!1.69e-08!61;UBERON:0002384!3.83e-08!375;UBERON:0003834!1.59e-07!5;UBERON:0001533!1.59e-07!5;UBERON:0003102!1.64e-07!95;UBERON:0001637!1.74e-07!42;UBERON:0003509!1.74e-07!42;UBERON:0004572!1.74e-07!42;UBERON:0002199!2.28e-07!45;UBERON:0002416!2.28e-07!45;UBERON:0004573!8.56e-07!33;UBERON:0004571!8.56e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;8.12e-13;5!UBERON:0001533;8.12e-13;5!UBERON:0003513;3.49e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,4.07e-13,5;UBERON:0001533,4.07e-13,5;UBERON:0003513,2.15e-09,7 | |||
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| ||
|short_description=p6@APCDD1L | |short_description=p6@APCDD1L | ||
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Latest revision as of 05:28, 17 September 2015
Short description: | p6@APCDD1L |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_APCDD1L_5end |
Coexpression cluster: | C2622_Osteoblast_Chondrocyte_meningioma_Fibroblast_mesenchymal_Smooth_tenocyte |
Association with transcript: | -159bp_to_ENST00000425773_5end |
EntrezGene: | APCDD1L |
HGNC: | 26892 |
UniProt: | A2A2P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 4.07e-13 | 5 |
stromal cell | 3.21e-08 | 28 |
skin fibroblast | 5.08e-08 | 23 |
multi fate stem cell | 8.46e-08 | 427 |
somatic stem cell | 1.45e-07 | 433 |
fibroblast | 1.71e-07 | 76 |
stem cell | 2.90e-07 | 441 |
chondroblast | 7.75e-07 | 6 |
chondrocyte | 7.75e-07 | 6 |
vascular associated smooth muscle cell | 8.06e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 4.07e-13 | 5 |
subclavian artery | 4.07e-13 | 5 |
trunk blood vessel | 2.15e-09 | 7 |