FFCP PHASE1:Hg19::chr20:57090346..57090361,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=164284 | |EntrezGene=164284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26892 | |HGNC=26892 | ||
|TSSclassifier=strong | |||
|UniProt=A2A2P3 | |UniProt=A2A2P3 | ||
|association_with_transcript=-159bp_to_ENST00000425773_5end | |association_with_transcript=-159bp_to_ENST00000425773_5end | ||
|cluster_id=chr20:57090346..57090361,- | |||
|coexpression_cluster_id=C2622 | |coexpression_cluster_id=C2622 | ||
|description=CAGE_peak_6_at_APCDD1L_5end | |description=CAGE_peak_6_at_APCDD1L_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!7.67e-26!180;CL:0000057!4.09e-16!75;CL:0000048!2.45e-15!430;CL:0000723!1.16e-14!436;CL:0000034!8.47e-14!444;CL:0002620!1.36e-12!23;CL:0000680!1.24e-09!57;CL:0000056!1.24e-09!57;CL:0000355!1.24e-09!57;CL:0000359!7.40e-09!32;CL:0002371!1.44e-08!591;CL:0000134!5.29e-08!358;CL:0000183!6.07e-08!59;CL:0000499!8.09e-08!27;CL:0000187!8.51e-08!54;CL:0002320!9.03e-08!365;CL:0002595!1.59e-07!5;CL:0000144!2.85e-07!625;CL:0000393!3.96e-07!60;CL:0000211!3.96e-07!60;CL:0000153!5.32e-07!9;CL:0000447!5.32e-07!9;CL:0000219!8.88e-07!390 | |ontology_enrichment_celltype=CL:0000055!7.67e-26!180;CL:0000057!4.09e-16!75;CL:0000048!2.45e-15!430;CL:0000723!1.16e-14!436;CL:0000034!8.47e-14!444;CL:0002620!1.36e-12!23;CL:0000680!1.24e-09!57;CL:0000056!1.24e-09!57;CL:0000355!1.24e-09!57;CL:0000359!7.40e-09!32;CL:0002371!1.44e-08!591;CL:0000134!5.29e-08!358;CL:0000183!6.07e-08!59;CL:0000499!8.09e-08!27;CL:0000187!8.51e-08!54;CL:0002320!9.03e-08!365;CL:0002595!1.59e-07!5;CL:0000144!2.85e-07!625;CL:0000393!3.96e-07!60;CL:0000211!3.96e-07!60;CL:0000153!5.32e-07!9;CL:0000447!5.32e-07!9;CL:0000219!8.88e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0002595;8.12e-13;5!CL:0002620;3.83e-08;23!CL:0000499;4.49e-08;28!CL:0000062;1.24e-07;9!CL:0000138;7.06e-07;6 | |ontology_enrichment_celltype_v019=CL:0002595;8.12e-13;5!CL:0002620;3.83e-08;23!CL:0000499;4.49e-08;28!CL:0000062;1.24e-07;9!CL:0000138;7.06e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002595,4.07e-13,5;CL:0000499,3.21e-08,28;CL:0002620,5.08e-08,23;CL:0000048,8.46e-08,427;CL:0000723,1.45e-07,433;CL:0000057,1.71e-07,76;CL:0000034,2.90e-07,441;CL:0000058,7.75e-07,6;CL:0000138,7.75e-07,6;CL:0000359,8.06e-07,32 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!6.75e-09!14;DOID:120!6.23e-07!27 | |ontology_enrichment_disease=DOID:2394!6.75e-09!14;DOID:120!6.23e-07!27 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!2.83e-10!82;UBERON:0004290!3.42e-10!70;UBERON:0000914!5.15e-10!83;UBERON:0002329!5.15e-10!83;UBERON:0003077!5.15e-10!83;UBERON:0003059!5.15e-10!83;UBERON:0007282!5.15e-10!83;UBERON:0009618!5.15e-10!83;UBERON:0007285!5.15e-10!83;UBERON:0002385!1.05e-08!63;UBERON:0001015!1.05e-08!63;UBERON:0000383!1.05e-08!63;UBERON:0001134!1.69e-08!61;UBERON:0002036!1.69e-08!61;UBERON:0003082!1.69e-08!61;UBERON:0002384!3.83e-08!375;UBERON:0003834!1.59e-07!5;UBERON:0001533!1.59e-07!5;UBERON:0003102!1.64e-07!95;UBERON:0001637!1.74e-07!42;UBERON:0003509!1.74e-07!42;UBERON:0004572!1.74e-07!42;UBERON:0002199!2.28e-07!45;UBERON:0002416!2.28e-07!45;UBERON:0004573!8.56e-07!33;UBERON:0004571!8.56e-07!33 | |ontology_enrichment_uberon=UBERON:0000486!2.83e-10!82;UBERON:0004290!3.42e-10!70;UBERON:0000914!5.15e-10!83;UBERON:0002329!5.15e-10!83;UBERON:0003077!5.15e-10!83;UBERON:0003059!5.15e-10!83;UBERON:0007282!5.15e-10!83;UBERON:0009618!5.15e-10!83;UBERON:0007285!5.15e-10!83;UBERON:0002385!1.05e-08!63;UBERON:0001015!1.05e-08!63;UBERON:0000383!1.05e-08!63;UBERON:0001134!1.69e-08!61;UBERON:0002036!1.69e-08!61;UBERON:0003082!1.69e-08!61;UBERON:0002384!3.83e-08!375;UBERON:0003834!1.59e-07!5;UBERON:0001533!1.59e-07!5;UBERON:0003102!1.64e-07!95;UBERON:0001637!1.74e-07!42;UBERON:0003509!1.74e-07!42;UBERON:0004572!1.74e-07!42;UBERON:0002199!2.28e-07!45;UBERON:0002416!2.28e-07!45;UBERON:0004573!8.56e-07!33;UBERON:0004571!8.56e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;8.12e-13;5!UBERON:0001533;8.12e-13;5!UBERON:0003513;3.49e-09;7 | |ontology_enrichment_uberon_v019=UBERON:0003834;8.12e-13;5!UBERON:0001533;8.12e-13;5!UBERON:0003513;3.49e-09;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,4.07e-13,5;UBERON:0001533,4.07e-13,5;UBERON:0003513,2.15e-09,7 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0.50133791063589,0.579386075843295,3.9764297352555,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2663051166458,0.397227542439656,0.573673241497627,0,1.12135520028461,0,2.22000793575444,0,0.134710672069688,0,0,0,0,2.18512053781224,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0.910161361938026,0,0,0,0,0.438977620880838,0.30648779579902,0.751190294532984,0,3.40840307808838,0,0,4.20127534518163,0.206105058476878,0.772921620136887,0.744467425326359,3.37552664482532,1.07180705677318,0.757301322732344,0.0920498986422993,0.323292113637624,2.84007674013291,1.10827308050404,0.847802961552438,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42198887333556,0,0,0.26593811658487,0,0,0,0.799266537048298,0,0.542621605391443,0,1.62868092146868,0,0,0,0,0.099972991182057,0,0,0,0,0,2.85273810081437,0.144781306667579,2.26023954805422,0.895304816199478,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,1.20378439891088,0,1.03473071292505,3.98535359121262,4.97796755062599,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0,0.920771839728375,2.24528075546459,0.128139149255701,0,1.12597744800525,0,0.462629081407967,0.887808626565635,0.410635780069046,0,0,0,0.40101294060657,0,1.7222167224691,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0,0,1.39453664789186,2.83331112147576,0.6970372701606,0.924100740528266,0,0,0.37064843820784,0.572499546967965,0,0,0,0,0,1.59101623962968,0,0,0,0,0.606547444719948,0,0,0,0.487426979262569,1.05650146756755,0,1.55545975149084,0,1.65409603063837,1.99031692572366,1.75380354101505,0,0,0.202910376962704,0.30982349809975,1.12678241012897,0,0.0982490410131212,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,1.92381168603681,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0.316801009558219,0,0,0,0,2.28841683889275,1.08599920350743,0.864221491201268,1.30634944043764,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11739237728355,0,0,0.895528817321244,0.467426619694449,0,0.568209015825267,0.251567901752575,0.889811221596536,0.457680136793847,0.453692771289717,0.621748802331122,0.295710299979268,0,1.34940933649081,0.621051827505038,0.414706207840855,2.39257543102195,0.521745061811734,0.601030435988874,0,0.406870733204662,0.545545977607678,0.322231671127465,0.464033759878494,0.398095888698616,0,1.37358282073117,1.01024846629776,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0.397832444232549,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,1.5510319283216,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,2.23197010900051,1.84870251452567,0.432626562123789,0,0,0.506794004045748,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0.50133791063589,0.579386075843295,3.9764297352555,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2663051166458,0.397227542439656,0.573673241497627,0,1.12135520028461,0,2.22000793575444,0,0.134710672069688,0,0,0,0,2.18512053781224,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0.910161361938026,0,0,0,0,0.438977620880838,0.30648779579902,0.751190294532984,0,3.40840307808838,0,0,4.20127534518163,0.206105058476878,0.772921620136887,0.744467425326359,3.37552664482532,1.07180705677318,0.757301322732344,0.0920498986422993,0.323292113637624,2.84007674013291,1.10827308050404,0.847802961552438,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42198887333556,0,0,0.26593811658487,0,0,0,0.799266537048298,0,0.542621605391443,0,1.62868092146868,0,0,0,0,0.099972991182057,0,0,0,0,0,2.85273810081437,0.144781306667579,2.26023954805422,0.895304816199478,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,1.20378439891088,0,1.03473071292505,3.98535359121262,4.97796755062599,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0,0.920771839728375,2.24528075546459,0.128139149255701,0,1.12597744800525,0,0.462629081407967,0.887808626565635,0.410635780069046,0,0,0,0.40101294060657,0,1.7222167224691,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0,0,1.39453664789186,2.83331112147576,0.6970372701606,0.924100740528266,0,0,0.37064843820784,0.572499546967965,0,0,0,0,0,1.59101623962968,0,0,0,0,0.606547444719948,0,0,0,0.487426979262569,1.05650146756755,0,1.55545975149084,0,1.65409603063837,1.99031692572366,1.75380354101505,0,0,0.202910376962704,0.30982349809975,1.12678241012897,0,0.0982490410131212,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,1.92381168603681,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0.316801009558219,0,0,0,0,2.28841683889275,1.08599920350743,0.864221491201268,1.30634944043764,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11739237728355,0,0,0.895528817321244,0.467426619694449,0,0.568209015825267,0.251567901752575,0.889811221596536,0.457680136793847,0.453692771289717,0.621748802331122,0.295710299979268,0,1.34940933649081,0.621051827505038,0.414706207840855,2.39257543102195,0.521745061811734,0.601030435988874,0,0.406870733204662,0.545545977607678,0.322231671127465,0.464033759878494,0.398095888698616,0,1.37358282073117,1.01024846629776,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0.397832444232549,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,1.5510319283216,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,2.23197010900051,1.84870251452567,0.432626562123789,0,0,0.506794004045748,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p6@APCDD1L | |short_description=p6@APCDD1L | ||
}} | }} |
Latest revision as of 05:28, 17 September 2015
Short description: | p6@APCDD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_APCDD1L_5end |
Coexpression cluster: | C2622_Osteoblast_Chondrocyte_meningioma_Fibroblast_mesenchymal_Smooth_tenocyte |
Association with transcript: | -159bp_to_ENST00000425773_5end |
EntrezGene: | APCDD1L |
HGNC: | 26892 |
UniProt: | A2A2P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 4.07e-13 | 5 |
stromal cell | 3.21e-08 | 28 |
skin fibroblast | 5.08e-08 | 23 |
multi fate stem cell | 8.46e-08 | 427 |
somatic stem cell | 1.45e-07 | 433 |
fibroblast | 1.71e-07 | 76 |
stem cell | 2.90e-07 | 441 |
chondroblast | 7.75e-07 | 6 |
chondrocyte | 7.75e-07 | 6 |
vascular associated smooth muscle cell | 8.06e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 4.07e-13 | 5 |
subclavian artery | 4.07e-13 | 5 |
trunk blood vessel | 2.15e-09 | 7 |