FFCP PHASE1:Hg19::chr8:18067610..18067634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9 | |EntrezGene=9 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7645 | |HGNC=7645 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5R8,P18440,Q400J6 | |UniProt=F5H5R8,P18440,Q400J6 | ||
|association_with_transcript=0bp_to_ENST00000539092,ENST00000541942,ENST00000545197,NM_000662,NM_001160170,NM_001160171,NM_001160172,NM_001160173,NM_001160175,NM_001160176,uc003wyq.2,uc003wyr.2,uc003wys.2,uc003wyt.2,uc003wyu.2,uc003wyv.2,uc010ltc.2_5end | |association_with_transcript=0bp_to_ENST00000539092,ENST00000541942,ENST00000545197,NM_000662,NM_001160170,NM_001160171,NM_001160172,NM_001160173,NM_001160175,NM_001160176,uc003wyq.2,uc003wyr.2,uc003wys.2,uc003wyt.2,uc003wyu.2,uc003wyv.2,uc010ltc.2_5end | ||
|cluster_id=chr8:18067610..18067634,+ | |||
|description=CAGE_peak_1_at_NAT1_5end | |description=CAGE_peak_1_at_NAT1_5end | ||
|id=chr8:18067610..18067634,+ | |id=chr8:18067610..18067634,+ | ||
|ontology_enrichment_celltype=CL:0000134!1.57e-23!358;CL:0002320!5.97e-23!365;CL:0000219!8.44e-20!390;CL:0000034!3.58e-19!444;CL:0000048!6.48e-19!430;CL:0000738!8.40e-19!140;CL:0002032!1.38e-18!165;CL:0000837!1.38e-18!165;CL:0000037!2.18e-18!172;CL:0000566!2.18e-18!172;CL:0000723!3.05e-18!436;CL:0000988!9.28e-17!182;CL:0000003!1.43e-16!722;CL:0002031!6.99e-16!124;CL:0000542!8.49e-15!53;CL:0000051!8.49e-15!53;CL:0000838!1.88e-14!52;CL:0000063!5.85e-14!578;CL:0002087!7.13e-14!119;CL:0000012!2.55e-11!682;CL:0000548!7.20e-11!679;CL:0000004!7.20e-11!679;CL:0000255!7.20e-11!679;CL:0002371!1.79e-10!591;CL:0000144!2.47e-10!625;CL:0000945!1.21e-09!24;CL:0000826!1.21e-09!24;CL:0000236!3.70e-07!14 | |ontology_enrichment_celltype=CL:0000134!1.57e-23!358;CL:0002320!5.97e-23!365;CL:0000219!8.44e-20!390;CL:0000034!3.58e-19!444;CL:0000048!6.48e-19!430;CL:0000738!8.40e-19!140;CL:0002032!1.38e-18!165;CL:0000837!1.38e-18!165;CL:0000037!2.18e-18!172;CL:0000566!2.18e-18!172;CL:0000723!3.05e-18!436;CL:0000988!9.28e-17!182;CL:0000003!1.43e-16!722;CL:0002031!6.99e-16!124;CL:0000542!8.49e-15!53;CL:0000051!8.49e-15!53;CL:0000838!1.88e-14!52;CL:0000063!5.85e-14!578;CL:0002087!7.13e-14!119;CL:0000012!2.55e-11!682;CL:0000548!7.20e-11!679;CL:0000004!7.20e-11!679;CL:0000255!7.20e-11!679;CL:0002371!1.79e-10!591;CL:0000144!2.47e-10!625;CL:0000945!1.21e-09!24;CL:0000826!1.21e-09!24;CL:0000236!3.70e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.55e-09;24!CL:0000542;3.24e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000134,4.23e-24,354;CL:0002320,1.81e-23,361;CL:0000219,2.00e-20,386;CL:0000034,1.32e-19,441;CL:0000048,2.88e-19,427;CL:0000723,1.17e-18,433;CL:0000738,1.86e-18,136;CL:0002032,1.92e-18,161;CL:0000837,1.92e-18,161;CL:0000037,3.09e-18,168;CL:0000988,4.29e-17,177;CL:0002031,1.63e-15,120;CL:0000542,4.95e-15,53;CL:0000051,4.95e-15,53;CL:0000838,1.11e-14,52;CL:0002087,1.73e-13,115;CL:0000945,8.72e-10,24;CL:0000826,8.72e-10,24;CL:0000236,2.94e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;3.24e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.96e-23!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.68e-23,371 | |||
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| ||
|short_description=p1@NAT1 | |short_description=p1@NAT1 | ||
}} | }} |
Latest revision as of 06:08, 17 September 2015
Short description: | p1@NAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539092, ENST00000541942, ENST00000545197, NM_000662, NM_001160170, NM_001160171, NM_001160172, NM_001160173, NM_001160175, NM_001160176, uc003wyq.2, uc003wyr.2, uc003wys.2, uc003wyt.2, uc003wyu.2, uc003wyv.2, uc010ltc.2_5end |
EntrezGene: | NAT1 |
HGNC: | 7645 |
UniProt: | F5H5R8P18440Q400J6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal cell | 4.23e-24 | 354 |
connective tissue cell | 1.81e-23 | 361 |
motile cell | 2.00e-20 | 386 |
stem cell | 1.32e-19 | 441 |
multi fate stem cell | 2.88e-19 | 427 |
somatic stem cell | 1.17e-18 | 433 |
leukocyte | 1.86e-18 | 136 |
hematopoietic oligopotent progenitor cell | 1.92e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-18 | 161 |
hematopoietic stem cell | 3.09e-18 | 168 |
hematopoietic cell | 4.29e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 1.63e-15 | 120 |
lymphocyte | 4.95e-15 | 53 |
common lymphoid progenitor | 4.95e-15 | 53 |
lymphoid lineage restricted progenitor cell | 1.11e-14 | 52 |
nongranular leukocyte | 1.73e-13 | 115 |
lymphocyte of B lineage | 8.72e-10 | 24 |
pro-B cell | 8.72e-10 | 24 |
B cell | 2.94e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.68e-23 | 371 |