FFCP PHASE1:Hg19::chr11:2016865..2016913,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2016865..2016913,-
|short_description=p9@H19
|description=CAGE_peak_9_at_H19_5end
|association_with_transcript=-62bp_to_BC010185_5end
|EntrezGene=283120
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283120 | |EntrezGene=283120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-62bp_to_BC010185_5end | |||
|cluster_id=chr11:2016865..2016913,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_9_at_H19_5end | |||
|id=chr11:2016865..2016913,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.63e-13;19!CL:0000188;4.39e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.44e-13,19;CL:0000188,4.59e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.60e-11!14;UBERON:0000158!2.60e-11!14;UBERON:0001557!5.39e-11!19;UBERON:0001737!4.92e-10!9;UBERON:0003104!6.03e-10!238;UBERON:0009142!6.03e-10!238;UBERON:0000077!8.26e-09!130;UBERON:0003124!1.09e-08!7;UBERON:0004119!1.26e-08!169;UBERON:0000925!1.26e-08!169;UBERON:0006595!1.26e-08!169;UBERON:0004921!2.32e-08!129;UBERON:0004185!2.32e-08!129;UBERON:0000478!3.11e-08!24;UBERON:0000481!5.48e-08!347;UBERON:0004923!1.20e-07!57;UBERON:0001041!1.21e-07!98;UBERON:0001007!2.12e-07!155;UBERON:0001555!2.12e-07!155;UBERON:0007026!2.12e-07!155;UBERON:0000468!5.44e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.15e-16;16!UBERON:0002036;2.15e-16;16!UBERON:0001737;1.68e-14;9!UBERON:0001557;1.68e-14;9!UBERON:0000478;1.65e-13;24!UBERON:0005631;5.15e-11;10!UBERON:0000158;5.15e-11;10!UBERON:0001987;6.93e-08;4!UBERON:0000922;9.90e-08;49!UBERON:0002385;1.38e-07;31!UBERON:0001015;1.38e-07;31!UBERON:0000383;1.38e-07;31!UBERON:0000305;9.46e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.72e-17,14;UBERON:0000158,4.72e-17,14;UBERON:0001737,1.71e-14,9;UBERON:0000478,1.48e-13,24;UBERON:0003124,1.93e-12,7;UBERON:0001557,2.80e-12,19;UBERON:0001987,6.94e-08,4;UBERON:0004340,6.94e-08,4;UBERON:0004871,1.05e-07,8;UBERON:0001041,3.06e-07,87;UBERON:0003104,4.33e-07,160;UBERON:0009142,4.33e-07,160;UBERON:0004119,5.45e-07,160;UBERON:0000925,5.45e-07,160;UBERON:0006595,5.45e-07,160;UBERON:0004923,9.29e-07,66;UBERON:0000305,9.48e-07,7 | |||
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| ||
|short_description=p9@H19 | |||
}} | }} |
Latest revision as of 06:13, 17 September 2015
Short description: | p9@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -62bp_to_BC010185_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.44e-13 | 19 |
cell of skeletal muscle | 4.59e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.72e-17 | 14 |
membranous layer | 4.72e-17 | 14 |
larynx | 1.71e-14 | 9 |
extraembryonic structure | 1.48e-13 | 24 |
chorion | 1.93e-12 | 7 |
upper respiratory tract | 2.80e-12 | 19 |
placenta | 6.94e-08 | 4 |
allantois | 6.94e-08 | 4 |
somatic layer of lateral plate mesoderm | 1.05e-07 | 8 |
foregut | 3.06e-07 | 87 |
mesenchyme | 4.33e-07 | 160 |
entire embryonic mesenchyme | 4.33e-07 | 160 |
endoderm-derived structure | 5.45e-07 | 160 |
endoderm | 5.45e-07 | 160 |
presumptive endoderm | 5.45e-07 | 160 |
organ component layer | 9.29e-07 | 66 |
amnion | 9.48e-07 | 7 |