FFCP PHASE1:Hg19::chr3:186857195..186857206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116832 | |EntrezGene=116832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17094 | |HGNC=17094 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EH5 | |UniProt=Q96EH5 | ||
|association_with_transcript=56bp_to_NM_052969,uc003fre.1,uc003frf.1_5end | |association_with_transcript=56bp_to_NM_052969,uc003fre.1,uc003frf.1_5end | ||
|cluster_id=chr3:186857195..186857206,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_RPL39L_5end | |description=CAGE_peak_4_at_RPL39L_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.79e-13;7!CL:0000586;1.79e-13;7!CL:0000542;3.96e-08;53!CL:0000945;8.38e-08;24!CL:0002127;3.26e-07;1!CL:0000785;3.26e-07;1!CL:0000911;3.26e-07;1!CL:0000819;3.26e-07;1!CL:0000814;3.26e-07;1!CL:0000817;8.00e-07;1 | |ontology_enrichment_celltype_v019=CL:0000039;1.79e-13;7!CL:0000586;1.79e-13;7!CL:0000542;3.96e-08;53!CL:0000945;8.38e-08;24!CL:0002127;3.26e-07;1!CL:0000785;3.26e-07;1!CL:0000911;3.26e-07;1!CL:0000819;3.26e-07;1!CL:0000814;3.26e-07;1!CL:0000817;8.00e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.51e-13,7;CL:0000586,1.51e-13,7;CL:0000542,8.55e-13,53;CL:0000051,8.55e-13,53;CL:0000838,5.85e-11,52;CL:0000817,1.79e-08,3;CL:0000945,7.07e-08,24;CL:0000826,7.07e-08,24;CL:0002127,2.99e-07,1;CL:0000914,2.99e-07,1;CL:0000911,2.99e-07,1;CL:0000814,2.99e-07,1;CL:0002042,2.99e-07,1;CL:0002039,2.99e-07,1;CL:0002040,2.99e-07,1;CL:0002041,2.99e-07,1;CL:0000819,3.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.54e-14;10!UBERON:0005564;1.54e-14;10!CL:0000051;3.96e-08;53 | |ontology_enrichment_development_v019=UBERON:0009117;1.54e-14;10!UBERON:0005564;1.54e-14;10!CL:0000051;3.96e-08;53 | ||
|ontology_enrichment_disease=DOID:14566!1.15e-11!239;DOID:162!2.17e-11!235;DOID:2531!7.74e-08!51;DOID:0060083!7.74e-08!51;DOID:0060058!1.43e-07!10;DOID:305!3.03e-07!106;DOID:0050687!5.12e-07!143 | |ontology_enrichment_disease=DOID:14566!1.15e-11!239;DOID:162!2.17e-11!235;DOID:2531!7.74e-08!51;DOID:0060083!7.74e-08!51;DOID:0060058!1.43e-07!10;DOID:305!3.03e-07!106;DOID:0050687!5.12e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.02e-19;10!DOID:2531;7.93e-10;51!DOID:0060083;7.93e-10;51!DOID:0060073;3.26e-07;1!DOID:8675;3.26e-07;1!DOID:12603;8.00e-07;1!DOID:2355;8.00e-07;1 | |ontology_enrichment_disease_v019=DOID:0060058;1.02e-19;10!DOID:2531;7.93e-10;51!DOID:0060083;7.93e-10;51!DOID:0060073;3.26e-07;1!DOID:8675;3.26e-07;1!DOID:12603;8.00e-07;1!DOID:2355;8.00e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.25e-19,10;DOID:2531,5.72e-16,51;DOID:0060083,5.72e-16,51;DOID:1240,4.84e-08,39;DOID:162,1.01e-07,235;DOID:14566,1.84e-07,239;DOID:0060073,3.57e-07,1;DOID:8675,3.57e-07,1;DOID:0050686,5.22e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.14e-18;8!UBERON:0003135;3.41e-13;11!UBERON:0000991;8.97e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0000473;3.14e-18;8!UBERON:0003135;3.41e-13;11!UBERON:0000991;8.97e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.90e-18,8;UBERON:0003135,3.21e-13,11;UBERON:0000991,8.72e-07,21;UBERON:0009196,8.72e-07,21;UBERON:0009117,8.72e-07,21;UBERON:0005564,8.72e-07,21 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0.626909442956176,0.286235987131057,0.273748850145768,0.251085279189606,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.6024118375565,0,1.54934401160603,0.284338464974843,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0.205601498999509,0.334372990781356,0,0,0,0.557052284425868,1.17842362989935,0.886135578334485,1.08321545506006,0.768547918354051,1.04047478047903,0.164437904603676,0.276350017785848,0,0,0,0,0.793165398882963,0,0.68725489096526,0,0,0.651083453856419,0,0.301150238155546,0,0,0.236777252044017,0.821127996921047,0.604820229674197,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,3.01251873644739,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.225222960966644,1.53316637465883,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0.368502951935304,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0.10075209822764,0.339121184620975,0,0,0,0.975789649036763,0.795178609928912,0.69716365721711,0.518305275076852,0.756962552626885,0,0,0,1.38134921352481,0,0,0.591534000199219,0.168584690078102,0,0.330881918197182,0.217879444092406,0.237270619111097,0.808987848960987,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0,0,0.53735113621709,0.581267877027924,0.766765358330422,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.308482478109971,0.300343057843917,0,0.336393253036082,0.43596006883328,0.22001485746285,0,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,2.69004345584465,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0,1.00034104211935,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.426133137080504,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0.511795582622668,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.563391205064483,0.286822704408103,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0.534120355637366,0,0.245040215981032,1.11481905075431,1.298422916788,0,1.59426272728822,0,0,0,0.649243880549111,0.842391534340376,0,0,0,0,0,0,2.55507742614196,0,0.307240764308458,0.447352215784832,0.166849141711909,0.390776190804081,0,0,0,0,1.4098700508785,0,0,0.485442086998054,1.00299045849731,1.42068073403207,0,0,0,0.994147647766298,0.422008249231538,0,0.824019371133798,0.211125408127993,0,0,0,0,0.738508832766417,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,1.70690172428249,0.762760950878299,0.709163045303809,0,0,0.347249989866585,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,1.0893846351899,0.697118721393016,0,0,2.99733075704478,0.538545866458633,0.434589487688032,0,0.183195186803725,0,5.10966490978682,0,0.498635045700469,0.451191321234361,0.392125068635479,0.503464760927528,0.189753732724185,0.317873157960757,0,0,0,0,0.995261931078505,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0,0,0,2.18945747058799,0.391329237864179,0,0,0,0.30607276163049,0,0,0.103688191397247,1.32930774541437,0.330991955875499,0.941798755221676,0,0.284609546029793,0,0.173559738335131,0.685946781900644,0.69647365264322,0.17472666824203,0,0.290268993867255,0.365446585430928,0.328461828212837,0,0,0,0,0.19871461170299,0.0633107959558787,0.782205530939212,0.240476460754601,0,0.999048047910651,0,0.114536596165916,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0.0984274815147488,1.01607998478941,0.795229689809303,0.136203406111576,0.803765742325096,0.550157746388935,1.24632101408756,0,0,0.060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| ||
|short_description=p4@RPL39L | |short_description=p4@RPL39L | ||
}} | }} |
Latest revision as of 06:25, 17 September 2015
Short description: | p4@RPL39L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPL39L_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 56bp_to_NM_052969, uc003fre.1, uc003frf.1_5end |
EntrezGene: | RPL39L |
HGNC: | 17094 |
UniProt: | Q96EH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.51e-13 | 7 |
germ cell | 1.51e-13 | 7 |
lymphocyte | 8.55e-13 | 53 |
common lymphoid progenitor | 8.55e-13 | 53 |
lymphoid lineage restricted progenitor cell | 5.85e-11 | 52 |
precursor B cell | 1.79e-08 | 3 |
lymphocyte of B lineage | 7.07e-08 | 24 |
pro-B cell | 7.07e-08 | 24 |
innate effector T cell | 2.99e-07 | 1 |
immature NK T cell | 2.99e-07 | 1 |
effector T cell | 2.99e-07 | 1 |
mature NK T cell | 2.99e-07 | 1 |
immature NK T cell stage IV | 2.99e-07 | 1 |
immature NK T cell stage I | 2.99e-07 | 1 |
immature NK T cell stage II | 2.99e-07 | 1 |
immature NK T cell stage III | 2.99e-07 | 1 |
B-1 B cell | 3.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 2.90e-18 | 8 |
male reproductive organ | 3.21e-13 | 11 |
gonad | 8.72e-07 | 21 |
indifferent external genitalia | 8.72e-07 | 21 |
indifferent gonad | 8.72e-07 | 21 |
gonad primordium | 8.72e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.25e-19 | 10 |
hematologic cancer | 5.72e-16 | 51 |
immune system cancer | 5.72e-16 | 51 |
leukemia | 4.84e-08 | 39 |
cancer | 1.01e-07 | 235 |
disease of cellular proliferation | 1.84e-07 | 239 |
lymphatic system cancer | 3.57e-07 | 1 |
lymphosarcoma | 3.57e-07 | 1 |
organ system cancer | 5.22e-07 | 137 |