FFCP PHASE1:Hg19::chr5:177558079..177558088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64777 | |EntrezGene=64777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26181 | |HGNC=26181 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_uc003mip.2_5end | |association_with_transcript=-6bp_to_uc003mip.2_5end | ||
|cluster_id=chr5:177558079..177558088,+ | |||
|description=CAGE_peak_4_at_RMND5B_5end | |description=CAGE_peak_4_at_RMND5B_5end | ||
|id=chr5:177558079..177558088,+ | |id=chr5:177558079..177558088,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.32e-07!254 | |ontology_enrichment_celltype=CL:0000066!5.32e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002188;2.68e-09;5!CL:0000540;6.83e-08;6!CL:0000404;6.83e-08;6!CL:1000746;6.98e-07;7!CL:1000612;6.98e-07;7 | |ontology_enrichment_celltype_v019=CL:0002188;2.68e-09;5!CL:0000540;6.83e-08;6!CL:0000404;6.83e-08;6!CL:1000746;6.98e-07;7!CL:1000612;6.98e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.68e-09,5;CL:0000540,7.58e-08,6;CL:0000031,7.58e-08,6;CL:0000404,7.58e-08,6;CL:1000746,6.98e-07,7;CL:1000612,6.98e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;6.83e-08;6 | |ontology_enrichment_development_v019=CL:0000031;6.83e-08;6 | ||
|ontology_enrichment_disease=DOID:305!2.49e-11!106;DOID:162!7.61e-09!235;DOID:0050687!1.67e-08!143;DOID:14566!3.93e-08!239 | |ontology_enrichment_disease=DOID:305!2.49e-11!106;DOID:162!7.61e-09!235;DOID:0050687!1.67e-08!143;DOID:14566!3.93e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:5093;5.10e-25;4!DOID:1612;5.10e-25;4 | |ontology_enrichment_disease_v019=DOID:5093;5.10e-25;4!DOID:1612;5.10e-25;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,4.54e-25,4;DOID:1612,4.54e-25,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.30e-10;10!UBERON:0001443;1.81e-09;11!UBERON:0000074;6.98e-07;7!UBERON:0001229;6.98e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000310;2.30e-10;10!UBERON:0001443;1.81e-09;11!UBERON:0000074;6.98e-07;7!UBERON:0001229;6.98e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.20e-10,10;UBERON:0001443,1.74e-09,11;UBERON:0010532,6.98e-07,7;UBERON:0000074,6.98e-07,7;UBERON:0001229,6.98e-07,7;UBERON:0001230,6.98e-07,7;UBERON:0003220,6.98e-07,7;UBERON:0005749,6.98e-07,7;UBERON:0004199,6.98e-07,7;UBERON:0004209,6.98e-07,7;UBERON:0004198,6.98e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0.6024118375565,0,1.00707360754392,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0.443067789167242,0,0.128091319725675,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.392937226493138,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0,0.805658634218294,0,0.488124115096339,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0.853815942907168,0.662648841607426,0.232387885739037,0.207322110030741,1.00928340350251,0,0,0,0,0,0,0.118306800039844,0.674338760312407,0.482022059766964,0.330881918197182,0,0.237270619111097,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.380508304469197,2.37061319387782,2.57545848628462,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0.197030760201927,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0.320182673410333,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.184161977871793,0.114814448164607,0,0,0,0,0.784349769176855,0,0.211103257785751,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0.929015875628594,0,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0.313359791546046,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.37428108081644,0,0.121360521749513,0.780103689942349,0,0.23874448473769,0.296964680832639,0,0.994147647766298,0.422008249231538,0,0.659215496907038,0.211125408127993,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,2.86470537193757,0.349839999984783,0,0,0.254253650292766,0.709163045303809,0.344743373241465,0,0.173624994933292,0,0,0,0.331737779793674,0.591095237907095,0.438770794307945,0.544692317594951,0,0.153900517007594,0,0,0.718061155278177,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0.392125068635479,0.671286347903371,0,0,0,0.489698424477443,0,0,0,0.265372693510018,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0.242780379534093,0.394584402849391,0,0,0,2.25485129121739,0.207376382794494,0,0,0.313932918407225,1.19472429772959,0.284609546029793,0,0,0,0.435296032902013,0.34945333648406,0,0.580537987734511,0.365446585430928,0.328461828212837,0.678923115418936,0.176512253383001,0.225980740780532,0,0,0.0633107959558787,0.586654148204409,0,0,0,0,0.572682980829578,0.514784993585894,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,1.05154941711726,0,0,0,0.798716001995964,0,0,0.134366944973453,0,0,0.315132729228895,0.576911008668165,0.202210631562555,0,0.592713324460491,0,0.408610218334727,0.321506296930038,1.10031549277787,1.24632101408756,0,0,0,0.335434687599266,0.157611414598396,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,1.32506888912221,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0.365377795142688,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,1.87333962322753,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0.303859956177382,0.138258436151731,0.194860308839388,0,0,0,0,0,0.39997479170986,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0.157265941855896,0,0,0,0.247871528518004,0.558644917973244,0.318004350653419,0.0788617450012534,0,0.352675943690684,0,0.192687675289379,1.41696576325585,0,0,0.504143392443436,0.13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| ||
|short_description=p4@RMND5B | |short_description=p4@RMND5B | ||
}} | }} |
Latest revision as of 07:33, 17 September 2015
Short description: | p4@RMND5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RMND5B_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_uc003mip.2_5end |
EntrezGene: | RMND5B |
HGNC: | 26181 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.68e-09 | 5 |
neuron | 7.58e-08 | 6 |
neuroblast | 7.58e-08 | 6 |
electrically signaling cell | 7.58e-08 | 6 |
glomerular cell | 6.98e-07 | 7 |
kidney corpuscule cell | 6.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
breast | 2.20e-10 | 10 |
chest | 1.74e-09 | 11 |
primitive nephron | 6.98e-07 | 7 |
renal glomerulus | 6.98e-07 | 7 |
renal corpuscle | 6.98e-07 | 7 |
glomerular capsule | 6.98e-07 | 7 |
metanephric mesenchyme | 6.98e-07 | 7 |
glomerular tuft | 6.98e-07 | 7 |
S-shaped body | 6.98e-07 | 7 |
renal vesicle | 6.98e-07 | 7 |
comma-shaped body | 6.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.54e-25 | 4 |
breast cancer | 4.54e-25 | 4 |