FFCP PHASE1:Hg19::chr8:19615073..19615088,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24290 | |||
|TSSclassifier=strong | |||
|UniProt=E5RGK2 | |||
|association_with_transcript=-257bp_to_ENST00000524213_5end | |||
|cluster_id=chr8:19615073..19615088,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_10_at_CSGALNACT1_5end | |||
|id=chr8:19615073..19615088,- | |||
|ontology_enrichment_celltype=CL:0000115!9.62e-10!35;CL:0002139!3.64e-09!24;CL:0002078!5.71e-08!44 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.93e-09;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;2.67e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,4.01e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000477!1.06e-21!286;UBERON:0007023!3.19e-21!115;UBERON:0000025!6.91e-18!194;UBERON:0001049!7.38e-18!57;UBERON:0005068!7.38e-18!57;UBERON:0006241!7.38e-18!57;UBERON:0007135!7.38e-18!57;UBERON:0001893!2.64e-17!34;UBERON:0002020!4.19e-17!34;UBERON:0003528!4.19e-17!34;UBERON:0004111!4.65e-17!241;UBERON:0002791!9.84e-17!33;UBERON:0002780!1.43e-16!41;UBERON:0001890!1.43e-16!41;UBERON:0006240!1.43e-16!41;UBERON:0002616!1.45e-16!59;UBERON:0003080!6.03e-16!42;UBERON:0001869!8.72e-16!32;UBERON:0000955!1.18e-13!69;UBERON:0006238!1.18e-13!69;UBERON:0001017!1.23e-13!82;UBERON:0005743!4.92e-13!86;UBERON:0000467!2.12e-12!625;UBERON:0000480!2.66e-12!626;UBERON:0002619!2.76e-12!22;UBERON:0000468!8.19e-12!659;UBERON:0002420!1.37e-10!9;UBERON:0007245!1.37e-10!9;UBERON:0010009!1.37e-10!9;UBERON:0010011!1.37e-10!9;UBERON:0000454!1.37e-10!9;UBERON:0000073!1.39e-10!94;UBERON:0001016!1.39e-10!94;UBERON:0003075!1.56e-10!86;UBERON:0007284!1.56e-10!86;UBERON:0001950!2.46e-10!20;UBERON:0000956!3.39e-10!25;UBERON:0000203!3.39e-10!25;UBERON:0002346!1.52e-09!90;UBERON:0001737!3.56e-09!9;UBERON:0002308!3.60e-09!9;UBERON:0000125!3.60e-09!9;UBERON:0003056!8.87e-09!61;UBERON:0000922!9.56e-09!612;UBERON:0000923!1.66e-08!604;UBERON:0005291!1.66e-08!604;UBERON:0006598!1.66e-08!604;UBERON:0002532!1.66e-08!604;UBERON:0002050!2.01e-08!605;UBERON:0005423!2.01e-08!605;UBERON:0009663!3.77e-08!7;UBERON:0000483!6.53e-08!309;UBERON:0000119!1.28e-07!312;UBERON:0000349!2.42e-07!5;UBERON:0000064!3.36e-07!219;UBERON:0000062!4.45e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;2.96e-21;2!UBERON:0000349;9.94e-19;5!UBERON:0002420;1.15e-10;9!UBERON:0007245;1.15e-10;9!UBERON:0010009;1.15e-10;9!UBERON:0010011;1.15e-10;9!UBERON:0000454;1.15e-10;9!UBERON:0002046;2.93e-09;5!UBERON:0002791;1.95e-07;32!UBERON:0001869;1.95e-07;32!UBERON:0002619;3.38e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,1.38e-21,2;UBERON:0000349,6.74e-19,5;UBERON:0002420,9.96e-11,9;UBERON:0007245,9.96e-11,9;UBERON:0010009,9.96e-11,9;UBERON:0010011,9.96e-11,9;UBERON:0000454,9.96e-11,9;UBERON:0002046,2.88e-09,5;UBERON:0004117,2.88e-09,5;UBERON:0007689,2.88e-09,5;UBERON:0007123,2.88e-09,5;UBERON:0003091,2.88e-09,5;UBERON:0002791,1.87e-07,32;UBERON:0001869,1.87e-07,32;UBERON:0002619,3.47e-07,22;UBERON:0003528,5.09e-07,34;UBERON:0002020,5.09e-07,34;UBERON:0001893,5.09e-07,34;UBERON:0001871,8.37e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.515151135268373,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0.575384784644301,0,0,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0.217188844705117,1.21079900526674,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0.694281003215189,0,0,0.275118041940067,0.835979866147242,0.775250277507987,1.06729878806013,0.66944122552934,0,0.760272105718513,0.976248230192678,0,1.62028389576352,0.535798369704479,0.22452937262617,0.225222960966644,0,0.949265659568129,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0.989067717114227,0,0,0,0,0,0,0,0.751190294532984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.674338760312407,1.44606617930089,0.55146986366197,0.653638332277218,0.237270619111097,0.134831308160164,0.392442930250692,0.769494313892781,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0.749007023947182,0,0.828831026872071,0.36807447515742,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.464845549297286,0.62962469366128,1.3940745403212,0,0,1.73986598415015,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0.876901770507525,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,1.9882952955326,2.2507106625682,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.537063524026827,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.472775363535873,0,0,0,0.885741385813839,0.964771509003264,0,0.110579259931225,0.295547618953547,0.438770794307945,0.980446171670911,0,0.0769502585037971,0.455768223388005,0,0.0897576444097721,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.313265848516366,0.404406797884062,0.802577647298789,0.468528891450678,0,0,0,0.789168805698781,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.290268993867255,0.65780385377567,0.574808199372465,0.290967049465258,0,0.225980740780532,0,0,0.443175571691151,0.195551382734803,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0.101998217636322,0,1.20084057741958,0.547621515567972,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0.0674035438541849,0,0,0.795229689809303,1.22583065500418,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0.104909176269996,0,1.6135860539956,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.26446520348538,0.684347351537318,0,0.427149650270779,0.628817220398664,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0.500763722825999,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0.899606224327209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0.798169295285756,1.02558182120378,0.504143392443436,0.207471757392654,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0.620060389503552,0.317079050969534,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0.171488009437418,0.135939465953663,0.263091094251396,0.118193840883968,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.588925401344836,0,0,1.18948980281472,0,0.257831551894309,0,0,0,0,0,0,0.430018749454354,0,0.271965960763659,0.436350690340377,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0.213233981900981,1.66645102024618,0,0,0,2.60953348940476,12.5312657154096,0,0,0,0.0717222053926763,0.665320713092027,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| |||
|short_description=p10@CSGALNACT1 | |||
}} |
Latest revision as of 07:42, 17 September 2015
Short description: | p10@CSGALNACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CSGALNACT1_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | -257bp_to_ENST00000524213_5end |
EntrezGene: | CSGALNACT1 |
HGNC: | 24290 |
UniProt: | E5RGK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amygdala | 1.38e-21 | 2 |
limbic system | 6.74e-19 | 5 |
basal ganglion | 9.96e-11 | 9 |
nuclear complex of neuraxis | 9.96e-11 | 9 |
aggregate regional part of brain | 9.96e-11 | 9 |
collection of basal ganglia | 9.96e-11 | 9 |
cerebral subcortex | 9.96e-11 | 9 |
thyroid gland | 2.88e-09 | 5 |
pharyngeal pouch | 2.88e-09 | 5 |
thyroid diverticulum | 2.88e-09 | 5 |
pharyngeal pouch 2 | 2.88e-09 | 5 |
thyroid primordium | 2.88e-09 | 5 |
regional part of telencephalon | 1.87e-07 | 32 |
cerebral hemisphere | 1.87e-07 | 32 |
regional part of cerebral cortex | 3.47e-07 | 22 |
brain grey matter | 5.09e-07 | 34 |
gray matter | 5.09e-07 | 34 |
telencephalon | 5.09e-07 | 34 |
temporal lobe | 8.37e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 4.01e-11 | 1 |