FFCP PHASE1:Hg19::chr12:130822417..130822439,+: Difference between revisions
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|id=chr12:130822417..130822439,+
|short_description=p2@PIWIL1
|description=CAGE_peak_2_at_PIWIL1_5end
|association_with_transcript=0bp_to_ENST00000245255,NM_0011909...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9271 | |EntrezGene=9271 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9007 | |HGNC=9007 | ||
|TSSclassifier=strong | |||
|UniProt=Q96J94 | |UniProt=Q96J94 | ||
|association_with_transcript=0bp_to_ENST00000245255,NM_001190971,NM_004764_5end | |||
|cluster_id=chr12:130822417..130822439,+ | |||
|coexpression_cluster_id=C3254 | |||
|description=CAGE_peak_2_at_PIWIL1_5end | |||
|id=chr12:130822417..130822439,+ | |||
|ontology_enrichment_celltype=CL:0000039!4.20e-10!7;CL:0000586!4.20e-10!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.92e-20;7!CL:0000586;2.92e-20;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.02e-20,7;CL:0000586,3.02e-20,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.56e-38;10!UBERON:0005564;4.56e-38;10 | |||
|ontology_enrichment_disease=DOID:0050619!5.59e-09!1;DOID:1357!5.59e-09!1;DOID:5409!3.54e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:0050619;4.72e-17;1!DOID:1357;4.72e-17;1!DOID:3095;2.01e-11;22!DOID:2994;2.01e-11;22!DOID:3493;5.94e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.72e-17,1;DOID:1357,4.72e-17,1;DOID:3095,1.98e-11,22;DOID:2994,1.98e-11,22;DOID:3493,5.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.97e-23!8;UBERON:0003135!1.03e-16!11;UBERON:0003101!1.51e-11!22;UBERON:0000079!1.51e-11!22;UBERON:0002110!2.27e-10!3;UBERON:0006242!2.27e-10!3;UBERON:0001764!5.59e-09!1;UBERON:0001825!5.59e-09!1;UBERON:0000991!1.17e-08!21;UBERON:0009196!1.17e-08!21;UBERON:0009117!1.17e-08!21;UBERON:0005564!1.17e-08!21;UBERON:0004458!2.00e-08!49;UBERON:0003112!2.84e-08!1;UBERON:0000032!2.84e-08!1;UBERON:0005253!2.84e-08!1;UBERON:0003128!2.84e-08!1;UBERON:0002241!2.84e-08!1;UBERON:0001703!2.84e-08!1;UBERON:0004761!2.84e-08!1;UBERON:0009617!2.84e-08!1;UBERON:0004176!2.98e-08!22;UBERON:0002323!5.82e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.63e-47;8!UBERON:0003135;1.25e-34;11!UBERON:0000991;3.22e-18;21!UBERON:0003101;2.14e-17;22!UBERON:0000079;2.14e-17;22!UBERON:0001764;4.72e-17;1!UBERON:0001825;4.72e-17;1!UBERON:0003133;1.34e-09;44!UBERON:0002323;2.00e-07;45!UBERON:0002553;3.10e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.71e-47,8;UBERON:0003135,1.29e-34,11;UBERON:0000991,3.28e-18,21;UBERON:0009196,3.28e-18,21;UBERON:0009117,3.28e-18,21;UBERON:0005564,3.28e-18,21;UBERON:0004176,2.18e-17,22;UBERON:0003101,2.18e-17,22;UBERON:0000079,2.18e-17,22;UBERON:0001764,4.72e-17,1;UBERON:0001825,4.72e-17,1;UBERON:0003133,2.93e-11,48;UBERON:0004458,5.41e-11,49;UBERON:0005156,4.11e-09,59;UBERON:0000990,4.11e-09,59;UBERON:0002553,7.87e-09,61;UBERON:0002323,2.51e-08,46;UBERON:0003886,4.37e-07,54 | |||
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|short_description=p2@PIWIL1 | |||
}} | }} |
Latest revision as of 08:43, 17 September 2015
Short description: | p2@PIWIL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PIWIL1_5end |
Coexpression cluster: | C3254_maxillary_adenocarcinoma_testicular_testis_synovial_small_peripheral |
Association with transcript: | 0bp_to_ENST00000245255, NM_001190971, NM_004764_5end |
EntrezGene: | PIWIL1 |
HGNC: | 9007 |
UniProt: | Q96J94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.02e-20 | 7 |
germ cell | 3.02e-20 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.71e-47 | 8 |
male reproductive organ | 1.29e-34 | 11 |
gonad | 3.28e-18 | 21 |
indifferent external genitalia | 3.28e-18 | 21 |
indifferent gonad | 3.28e-18 | 21 |
gonad primordium | 3.28e-18 | 21 |
external genitalia | 2.18e-17 | 22 |
male organism | 2.18e-17 | 22 |
male reproductive system | 2.18e-17 | 22 |
maxillary sinus | 4.72e-17 | 1 |
paranasal sinus | 4.72e-17 | 1 |
reproductive organ | 2.93e-11 | 48 |
body cavity or lining | 5.41e-11 | 49 |
reproductive structure | 4.11e-09 | 59 |
reproductive system | 4.11e-09 | 59 |
anatomical cavity | 7.87e-09 | 61 |
body cavity | 2.51e-08 | 46 |
body cavity precursor | 4.37e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.72e-17 | 1 |
maxillary sinus cancer | 4.72e-17 | 1 |
germ cell and embryonal cancer | 1.98e-11 | 22 |
germ cell cancer | 1.98e-11 | 22 |
signet ring cell adenocarcinoma | 5.94e-09 | 2 |