FFCP PHASE1:Hg19::chr11:2160468..2160486,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=132bp_to_ENST00000416167_5end | |association_with_transcript=132bp_to_ENST00000416167_5end | ||
|cluster_id=chr11:2160468..2160486,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_35_at_IGF2_5end | |description=CAGE_peak_35_at_IGF2_5end | ||
|id=chr11:2160468..2160486,- | |id=chr11:2160468..2160486,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.97e-20;19!CL:0002537;1.02e-09;5!CL:0002541;6.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.21e-20,19;CL:0002537,1.86e-09,5;CL:0002541,5.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.52e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.01e-14!14;UBERON:0000158!2.01e-14!14;UBERON:0000478!3.26e-10!24;UBERON:0000481!7.20e-09!347;UBERON:0004119!1.41e-08!169;UBERON:0000925!1.41e-08!169;UBERON:0006595!1.41e-08!169;UBERON:0003124!3.36e-08!7;UBERON:0000305!7.62e-08!7;UBERON:0001046!8.15e-08!19;UBERON:0000064!1.50e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.34e-20;24!UBERON:0005631;1.25e-18;10!UBERON:0000158;1.25e-18;10!UBERON:0000305;2.35e-13;7!UBERON:0000922;3.05e-09;49!UBERON:0001987;2.23e-08;4!UBERON:0005409;1.65e-07;22!UBERON:0003124;6.11e-07;3!UBERON:0000920;6.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.76e-25,14;UBERON:0000158,3.76e-25,14;UBERON:0000478,6.01e-20,24;UBERON:0003124,9.87e-14,7;UBERON:0000305,4.41e-13,7;UBERON:0004871,2.81e-11,8;UBERON:0001987,2.04e-08,4;UBERON:0004340,2.04e-08,4;UBERON:0004923,6.81e-08,66;UBERON:0004119,3.15e-07,160;UBERON:0000925,3.15e-07,160;UBERON:0006595,3.15e-07,160;UBERON:0000920,5.62e-07,3 | |||
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| ||
|short_description=p35@IGF2 | |short_description=p35@IGF2 | ||
}} | }} |
Latest revision as of 08:44, 17 September 2015
Short description: | p35@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 132bp_to_ENST00000416167_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.21e-20 | 19 |
amnion mesenchymal stem cell | 1.86e-09 | 5 |
chorionic membrane mesenchymal stem cell | 5.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.76e-25 | 14 |
membranous layer | 3.76e-25 | 14 |
extraembryonic structure | 6.01e-20 | 24 |
chorion | 9.87e-14 | 7 |
amnion | 4.41e-13 | 7 |
somatic layer of lateral plate mesoderm | 2.81e-11 | 8 |
placenta | 2.04e-08 | 4 |
allantois | 2.04e-08 | 4 |
organ component layer | 6.81e-08 | 66 |
endoderm-derived structure | 3.15e-07 | 160 |
endoderm | 3.15e-07 | 160 |
presumptive endoderm | 3.15e-07 | 160 |
egg chorion | 5.62e-07 | 3 |