FFCP PHASE1:Hg19::chr4:2366525..2366579,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:2366525..2366579,-
|short_description=p3@ZFYVE28
|description=CAGE_peak_3_at_ZFYVE28_5end
|association_with_transcript=0bp_to_ENST00000504743,ENST000005151...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57732 | |EntrezGene=57732 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29334 | |HGNC=29334 | ||
|TSSclassifier=strong | |||
|UniProt=E9PB64 | |UniProt=E9PB64 | ||
|association_with_transcript=0bp_to_ENST00000504743,ENST00000515169_5end | |||
|cluster_id=chr4:2366525..2366579,- | |||
|description=CAGE_peak_3_at_ZFYVE28_5end | |||
|id=chr4:2366525..2366579,- | |||
|ontology_enrichment_celltype=CL:0000057!1.61e-11!75;CL:0000055!6.52e-11!180;CL:0000192!2.30e-07!42;CL:0000514!2.30e-07!42;CL:0000187!3.87e-07!54;CL:0000183!4.11e-07!59;CL:0000680!4.23e-07!57;CL:0000056!4.23e-07!57;CL:0000355!4.23e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.04e-11,76;CL:0000192,5.53e-08,43;CL:0000514,5.53e-08,43;CL:0000359,4.56e-07,32;CL:0000187,5.25e-07,55;CL:0000680,5.44e-07,58;CL:0000056,5.44e-07,58;CL:0000355,5.44e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.79e-08!365;UBERON:0003102!1.13e-07!95;UBERON:0000914!5.04e-07!83;UBERON:0002329!5.04e-07!83;UBERON:0003077!5.04e-07!83;UBERON:0003059!5.04e-07!83;UBERON:0007282!5.04e-07!83;UBERON:0009618!5.04e-07!83;UBERON:0007285!5.04e-07!83;UBERON:0000486!8.72e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.21e-07;9!UBERON:0000042;8.21e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.94e-07,99 | |||
|phase1_expression=3.27021082687002,2.35510576280081,3.80576891059122,4.00293193412522,3.5756887554183,2.61701557230111,5.06599756336621,1.26343974685366,2.61185628199839,2.7030733015166,4.88460817580699,2.40285509343189,2.11013582582763,0.990130823680373,2.31978163009541,0,0.602694528023977,0,0.975865597581014,0.246242116153576,0.612002073732759,1.88072832886853,1.71741592278634,0.821246550437305,1.25542639594803,0.152826811495903,0,0,0,0.767658796194425,0.619264493264304,0.919421224478927,1.8072355126695,0.739508020333575,0,0,0.587200878669695,0.553995408531877,0.802177789880567,1.51907609501096,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0.645484683583826,1.35426486594342,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0.422510572623884,0,0.209658645508376,0.22465726229299,0,0,0,0.19891667719909,0.547992461293902,5.27988733383968,1.63841583378639,0.889509253863555,1.70692089026603,1.60158394814405,2.29900975981793,2.64417949113945,2.86216126360609,2.84606484554724,2.34894875748376,1.14681968437569,0,0,1.58030450865046,5.31116379307349,2.35806457649499,3.08402248499264,0.501559486172034,3.91106719960308,3.78758244587787,1.94826728407911,0.111410456885174,0.883817722424512,1.55073726208535,2.16643091012012,0.768547918354051,0.390178042679635,0.986627427622057,1.93445012450094,1.15921234294021,5.33831627383417,5.08327573370455,3.1360657141493,0.679856056185397,4.98186641682498,2.74901956386104,3.03623630423403,3.82278497188916,5.85975108470777,5.70271226669025,4.06552821509986,2.55973222308837,1.24930726552346,2.36777252044017,0.821127996921047,2.62088766192152,1.60464117470104,5.50332734754636,7.31420598941885,1.34140171940727,1.15076305659177,1.44575660953827,3.00802746381534,2.462390822334,1.5905718941022,0.973269740605272,0.661743720148475,1.77383517970051,0.614843499851882,2.0956652079634,1.82147644146271,1.11235332835329,0.324547393654683,0.348259474598534,0.398873881556595,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,1.52054421143703,0,0,0,0.535798369704479,0.44905874525234,0.112611480483322,0,0,0,0,0,2.61656431285521,3.97577561356255,3.67228483827281,8.73900593367244,7.45775213946916,1.77334191099179,1.68203280042692,1.06748995729705,0.74000264525148,0.933633106199299,1.34710672069688,1.47115712802113,0.605429710579726,0,1.17160715916898,3.43376084513353,0.570471821544449,1.64393548606981,1.17434498643765,1.61872944368132,0.702254033511242,2.24569588380383,1.71968044236475,2.9964476540972,1.18800285728205,5.93440630268536,6.37112953356618,7.90479955997862,1.34668891163253,1.37630371859161,2.77064115484183,1.75591048352335,3.0648779579902,2.10333282469236,0.907457465280168,5.91985797773244,1.49490172172997,1.27159140695737,5.40163972951924,2.98852334791473,10.5632621418708,4.83903826462134,2.86919764810153,1.94874010322397,9.08761587278812,5.06274442532646,4.0411514204703,6.74518225781567,3.22406714328449,2.54340888465731,0.966304265816484,1.63647672354501,1.14721838155602,0,0,0,0,0,0,0,0,6.90674606762403,3.25057549622385,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,1.26755034821831,0.982827216677626,0,2.20731549707325,0,0.514703430895577,0.219500570817251,0,1.00528972411631,0.740707561268237,2.6064664424826,5.19967392639789,4.3299402607582,0.579652024875384,1.05667824812239,0.288732895522148,0,0.190254152234598,3.1608175918371,6.86788929675898,0,0,0,1.87467667973554,1.34385702559088,1.13420077793909,0.268675568108545,0,0.383382679165211,0,0.352193736052904,0.829312462163088,1.00883967391873,0.6312121671319,0.571481048629521,0.763976851116555,1.17217447210047,1.71072446022705,0.822619941626588,2.10240140490742,3.14409075893636,0.112131084345361,0.43596006883328,0,3.49033632546,7.15312891703765,0,3.98907174877306,3.12022310734098,1.28603687131071,0,1.8649552531127,1.42977993658148,2.17048642156577,4.11620168390384,0,1.77695974371273,1.58390374586686,2.71295439353627,0.871533458600294,2.89921674427965,0,0,0,2.39624855491583,6.89171615004683,0,1.01346914667305,1.02738161275192,1.43248770591916,0,1.77327684181734,3.23441362289276,4.2353201972317,2.03275699377971,0,0.773288812777695,0.502548796003046,0,0.749007023947182,0,0,0.24538298343828,1.00034104211935,1.62759014219841,1.66376689224646,2.14114786556594,5.83498935625558,4.68565659970853,0.902838299183157,4.5481500811197,4.1389228517002,0,1.47495334833363,2.25897397617015,0.391602314925481,1.02943027143257,1.44737618286021,2.15714200818617,1.70764092485511,1.21251028578504,3.32870879020994,2.72151263996712,4.71404834855676,6.75232682467475,3.92924132206303,4.48487022394953,3.07024349440022,6.27330292460069,4.45254199334973,0.771048469013278,0.887808626565635,0.98552587216571,1.55776328755086,2.5566283261191,0,0.802025881213139,0.552485933615378,2.29628896329214,2.54927635209404,3.14698595902618,0.451199612907412,0.924184045252977,1.56869953835371,0,0.844413031143006,1.13733384070897,0.340187410553031,0.64774774830641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| ||
|short_description=p3@ZFYVE28 | |||
}} | }} |
Latest revision as of 09:08, 17 September 2015
Short description: | p3@ZFYVE28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZFYVE28_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000504743, ENST00000515169_5end |
EntrezGene: | ZFYVE28 |
HGNC: | 29334 |
UniProt: | E9PB64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.04e-11 | 76 |
smooth muscle cell | 5.53e-08 | 43 |
smooth muscle myoblast | 5.53e-08 | 43 |
vascular associated smooth muscle cell | 4.56e-07 | 32 |
muscle cell | 5.25e-07 | 55 |
muscle precursor cell | 5.44e-07 | 58 |
myoblast | 5.44e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.44e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.94e-07 | 99 |