FFCP PHASE1:Hg19::chr7:155326532..155326573,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285888 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27786 | |||
|TSSclassifier=strong | |||
|UniProt=Q3B7I2 | |||
|association_with_transcript=0bp_to_ENST00000321736,ENST00000406197,NM_001103176,uc003wmc.1_5end | |||
|cluster_id=chr7:155326532..155326573,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_CNPY1_5end | |||
|id=chr7:155326532..155326573,- | |||
|ontology_enrichment_celltype=CL:0000242!1.03e-19!2;CL:0002603!2.32e-13!3;CL:0000594!4.84e-13!3;CL:0000095!4.62e-12!17;CL:0000123!4.62e-12!17;CL:0000035!2.40e-11!20;CL:0002319!1.93e-08!25;CL:0000312!1.97e-08!5;CL:0000333!2.66e-07!41;CL:0000240!3.66e-07!6;CL:0000311!3.66e-07!6;CL:0000079!3.66e-07!6;CL:0000237!3.66e-07!6;CL:0000036!3.66e-07!6;CL:0000357!3.66e-07!6;CL:0000114!3.66e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.96e-66;2!CL:0000242;3.96e-66;2!CL:0000312;3.11e-27;5!CL:0000240;6.78e-23;6!CL:0000311;6.78e-23;6!CL:0000079;6.78e-23;6!CL:0000237;6.78e-23;6!CL:0000095;2.39e-16;17!CL:0000362;1.22e-15;9!CL:0002603;2.59e-12;3!CL:0002319;9.62e-12;25!CL:0002159;1.99e-10;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.73e-66,2;CL:0000312,4.06e-27,5;CL:0000240,8.47e-23,6;CL:0000311,8.47e-23,6;CL:0000079,8.47e-23,6;CL:0000237,8.47e-23,6;CL:0000036,8.47e-23,6;CL:0000357,8.47e-23,6;CL:0000114,8.47e-23,6;CL:0000095,2.52e-16,17;CL:0000123,2.52e-16,17;CL:0000362,1.41e-15,9;CL:0002603,2.31e-12,3;CL:0002319,9.99e-12,25;CL:0002159,2.19e-10,14;CL:0000333,1.25e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.81e-45;3!CL:0000357;6.78e-23;6!CL:0000114;6.78e-23;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!5.91e-37!12;UBERON:0002028!5.91e-37!12;UBERON:0007277!5.91e-37!12;UBERON:0002680!1.55e-36!9;UBERON:0001895!1.55e-36!9;UBERON:0010092!1.55e-36!9;UBERON:0004732!4.56e-34!13;UBERON:0003076!1.91e-29!15;UBERON:0003057!1.91e-29!15;UBERON:0002037!2.93e-25!6;UBERON:0006215!2.93e-25!6;UBERON:0000988!5.15e-13!3;UBERON:0000073!1.44e-11!94;UBERON:0001016!1.44e-11!94;UBERON:0001049!1.67e-11!57;UBERON:0005068!1.67e-11!57;UBERON:0006241!1.67e-11!57;UBERON:0007135!1.67e-11!57;UBERON:0000955!2.45e-11!69;UBERON:0006238!2.45e-11!69;UBERON:0002616!4.46e-11!59;UBERON:0003075!6.50e-11!86;UBERON:0007284!6.50e-11!86;UBERON:0002298!8.23e-11!8;UBERON:0005743!9.06e-11!86;UBERON:0002346!2.34e-10!90;UBERON:0004121!1.93e-09!169;UBERON:0001017!2.39e-09!82;UBERON:0000924!3.62e-09!173;UBERON:0006601!3.62e-09!173;UBERON:0000966!4.37e-08!5;UBERON:0005388!4.37e-08!5;UBERON:0001802!4.37e-08!5;UBERON:0000033!4.55e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.35e-50;6!UBERON:0002680;1.24e-33;9!UBERON:0001895;1.24e-33;9!UBERON:0004733;1.81e-25;12!UBERON:0002028;1.81e-25;12!UBERON:0004732;1.39e-23;13!UBERON:0001003;8.46e-10;15!UBERON:0007376;8.46e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.84e-50,6;UBERON:0006215,3.84e-50,6;UBERON:0002680,8.87e-34,9;UBERON:0001895,8.87e-34,9;UBERON:0010092,8.87e-34,9;UBERON:0004733,1.41e-25,12;UBERON:0002028,1.41e-25,12;UBERON:0007277,1.41e-25,12;UBERON:0004732,1.11e-23,13;UBERON:0003076,1.20e-20,15;UBERON:0003057,1.20e-20,15;UBERON:0001003,9.25e-10,15;UBERON:0007376,9.25e-10,15;UBERON:0007383,9.25e-10,15;UBERON:0010371,2.57e-08,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60057375499824,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322260734604821,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37897349296586,0,0,0,0,0,7.29823115546083,1.77328571372128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0,0,0,0,0.285465333544967,0,1.40500471742064,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CNPY1 | |||
}} |
Latest revision as of 09:59, 17 September 2015
Short description: | p1@CNPY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNPY1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000321736, ENST00000406197, NM_001103176, uc003wmc.1_5end |
EntrezGene: | CNPY1 |
HGNC: | 27786 |
UniProt: | Q3B7I2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.73e-66 | 2 |
keratinocyte | 4.06e-27 | 5 |
stratified squamous epithelial cell | 8.47e-23 | 6 |
keratin accumulating cell | 8.47e-23 | 6 |
stratified epithelial cell | 8.47e-23 | 6 |
keratinizing barrier epithelial cell | 8.47e-23 | 6 |
epithelial fate stem cell | 8.47e-23 | 6 |
stratified epithelial stem cell | 8.47e-23 | 6 |
surface ectodermal cell | 8.47e-23 | 6 |
neuron associated cell | 2.52e-16 | 17 |
neuron associated cell (sensu Vertebrata) | 2.52e-16 | 17 |
epidermal cell | 1.41e-15 | 9 |
astrocyte of the cerebellum | 2.31e-12 | 3 |
neural cell | 9.99e-12 | 25 |
general ecto-epithelial cell | 2.19e-10 | 14 |
migratory neural crest cell | 1.25e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.84e-50 | 6 |
rhombic lip | 3.84e-50 | 6 |
regional part of metencephalon | 8.87e-34 | 9 |
metencephalon | 8.87e-34 | 9 |
future metencephalon | 8.87e-34 | 9 |
segmental subdivision of hindbrain | 1.41e-25 | 12 |
hindbrain | 1.41e-25 | 12 |
presumptive hindbrain | 1.41e-25 | 12 |
segmental subdivision of nervous system | 1.11e-23 | 13 |
posterior neural tube | 1.20e-20 | 15 |
chordal neural plate | 1.20e-20 | 15 |
skin epidermis | 9.25e-10 | 15 |
outer epithelium | 9.25e-10 | 15 |
enveloping layer of ectoderm | 9.25e-10 | 15 |
ecto-epithelium | 2.57e-08 | 104 |