FFCP PHASE1:Hg19::chr3:190333071..190333084,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3556 | |EntrezGene=3556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5995 | |HGNC=5995 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000412080_5end | |association_with_transcript=-12bp_to_ENST00000412080_5end | ||
|cluster_id=chr3:190333071..190333084,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_IL1RAP_5end | |description=CAGE_peak_6_at_IL1RAP_5end | ||
|id=chr3:190333071..190333084,+ | |id=chr3:190333071..190333084,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.50e-53!12;CL:0000417!1.50e-53!12;CL:0000668!1.50e-53!12;CL:0000414!1.50e-53!12;CL:0000412!1.50e-53!12;CL:0000182!1.50e-53!12;CL:0000223!7.15e-11!59 | |ontology_enrichment_celltype=CL:0000181!1.50e-53!12;CL:0000417!1.50e-53!12;CL:0000668!1.50e-53!12;CL:0000414!1.50e-53!12;CL:0000412!1.50e-53!12;CL:0000182!1.50e-53!12;CL:0000223!7.15e-11!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.48e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.48e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.10e-60!19;UBERON:0006925!6.10e-60!19;UBERON:0008836!6.10e-60!19;UBERON:0005057!3.07e-55!26;UBERON:0008835!9.48e-52!22;UBERON:0003894!9.48e-52!22;UBERON:0009854!1.71e-49!23;UBERON:0007499!1.61e-45!25;UBERON:0009497!1.61e-45!25;UBERON:0000015!1.61e-45!25;UBERON:0002423!1.61e-45!25;UBERON:0006235!1.61e-45!25;UBERON:0004161!1.61e-45!25;UBERON:0009856!9.20e-44!26;UBERON:0002365!1.14e-36!31;UBERON:0002330!1.14e-36!31;UBERON:0002368!1.88e-32!35;UBERON:0005172!6.15e-26!55;UBERON:0005173!6.15e-26!55;UBERON:0000949!3.53e-25!45;UBERON:0002417!2.41e-23!61;UBERON:0000916!2.41e-23!61;UBERON:0003929!6.29e-21!54;UBERON:0002530!4.01e-19!59;UBERON:0001041!2.42e-14!98;UBERON:0005911!1.21e-13!82;UBERON:0005177!4.34e-13!107;UBERON:0009569!2.31e-12!113;UBERON:0002405!5.00e-12!115;UBERON:0000466!5.03e-11!126;UBERON:0000077!1.15e-10!130;UBERON:0004921!1.15e-10!129;UBERON:0004185!1.15e-10!129;UBERON:0003914!2.49e-09!118;UBERON:0001007!8.86e-09!155;UBERON:0001555!8.86e-09!155;UBERON:0007026!8.86e-09!155;UBERON:0001048!4.21e-08!168;UBERON:0004119!5.34e-08!169;UBERON:0000925!5.34e-08!169;UBERON:0006595!5.34e-08!169;UBERON:0000490!6.76e-08!138;UBERON:0005256!1.34e-07!143;UBERON:0002106!2.97e-07!3;UBERON:0004854!2.97e-07!3;UBERON:0009034!2.97e-07!3;UBERON:0002095!2.97e-07!3;UBERON:0004782!2.97e-07!3;UBERON:0003281!2.97e-07!3;UBERON:0009664!2.97e-07!3;UBERON:0002296!2.97e-07!3;UBERON:0005602!2.97e-07!3;UBERON:0001179!2.97e-07!3;UBERON:0006293!2.97e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-37;19!UBERON:0006925;1.91e-37;19!UBERON:0002423;1.35e-28;25!UBERON:0002365;4.28e-23;31!UBERON:0002330;4.28e-23;31!UBERON:0002368;6.01e-20;33!UBERON:0000949;1.80e-14;43!UBERON:0005172;1.95e-10;52!UBERON:0005173;1.95e-10;52!UBERON:0002417;4.56e-08;58!UBERON:0000916;4.56e-08;58!UBERON:0002530;1.30e-07;57!UBERON:0001007;1.71e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.91e-37,19;UBERON:0006925,1.91e-37,19;UBERON:0008836,1.91e-37,19;UBERON:0008835,2.03e-32,22;UBERON:0003894,2.03e-32,22;UBERON:0009854,4.92e-31,23;UBERON:0007499,1.35e-28,25;UBERON:0009497,1.35e-28,25;UBERON:0000015,1.35e-28,25;UBERON:0002423,1.35e-28,25;UBERON:0006235,1.35e-28,25;UBERON:0004161,1.35e-28,25;UBERON:0009856,1.62e-27,26;UBERON:0002365,3.66e-23,31;UBERON:0002330,3.66e-23,31;UBERON:0002368,1.43e-20,35;UBERON:0000949,4.25e-16,45;UBERON:0003929,1.76e-13,54;UBERON:0005172,1.76e-13,54;UBERON:0005173,1.76e-13,54;UBERON:0002530,2.28e-12,59;UBERON:0002417,3.62e-12,60;UBERON:0000916,3.62e-12,60;UBERON:0005911,5.51e-09,82;UBERON:0001041,1.75e-08,87;UBERON:0005177,2.43e-07,101 | |||
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|short_description=p6@IL1RAP | |short_description=p6@IL1RAP | ||
}} | }} |
Latest revision as of 10:05, 17 September 2015
Short description: | p6@IL1RAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IL1RAP_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -12bp_to_ENST00000412080_5end |
EntrezGene: | IL1RAP |
HGNC: | 5995 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.48e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-37 | 19 |
digestive gland | 1.91e-37 | 19 |
liver bud | 1.91e-37 | 19 |
hepatic diverticulum | 2.03e-32 | 22 |
liver primordium | 2.03e-32 | 22 |
digestive tract diverticulum | 4.92e-31 | 23 |
epithelial sac | 1.35e-28 | 25 |
epithelium of foregut-midgut junction | 1.35e-28 | 25 |
anatomical boundary | 1.35e-28 | 25 |
hepatobiliary system | 1.35e-28 | 25 |
foregut-midgut junction | 1.35e-28 | 25 |
septum transversum | 1.35e-28 | 25 |
sac | 1.62e-27 | 26 |
exocrine gland | 3.66e-23 | 31 |
exocrine system | 3.66e-23 | 31 |
endocrine gland | 1.43e-20 | 35 |
endocrine system | 4.25e-16 | 45 |
gut epithelium | 1.76e-13 | 54 |
abdomen element | 1.76e-13 | 54 |
abdominal segment element | 1.76e-13 | 54 |
gland | 2.28e-12 | 59 |
abdominal segment of trunk | 3.62e-12 | 60 |
abdomen | 3.62e-12 | 60 |
endo-epithelium | 5.51e-09 | 82 |
foregut | 1.75e-08 | 87 |
trunk region element | 2.43e-07 | 101 |