FFCP PHASE1:Hg19::chr3:191047053..191047089,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152137 | |EntrezGene=152137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18111 | |HGNC=18111 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVM0 | |UniProt=Q8IVM0 | ||
|association_with_transcript=179bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end | |association_with_transcript=179bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end | ||
|cluster_id=chr3:191047053..191047089,+ | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_4_at_CCDC50_5end | |description=CAGE_peak_4_at_CCDC50_5end |
Latest revision as of 10:27, 17 September 2015
Short description: | p4@CCDC50 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC50_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 179bp_to_ENST00000392456, NM_174908, NM_178335, uc003fsv.2, uc003fsw.2_5end |
EntrezGene: | CCDC50 |
HGNC: | 18111 |
UniProt: | Q8IVM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@CCDC50 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.79e-17 | 121 |
endothelial cell | 2.75e-12 | 36 |
endothelial cell of vascular tree | 2.33e-11 | 24 |
meso-epithelial cell | 3.63e-11 | 45 |
vascular associated smooth muscle cell | 4.12e-10 | 32 |
lining cell | 2.32e-09 | 58 |
barrier cell | 2.32e-09 | 58 |
smooth muscle cell | 9.41e-09 | 43 |
smooth muscle myoblast | 9.41e-09 | 43 |
blood vessel endothelial cell | 9.55e-09 | 18 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
---|---|---|
vasculature | 5.20e-23 | 78 |
vascular system | 5.20e-23 | 78 |
cardiovascular system | 1.77e-22 | 109 |
vessel | 7.50e-22 | 68 |
circulatory system | 3.21e-21 | 112 |
splanchnic layer of lateral plate mesoderm | 2.30e-20 | 83 |
epithelial tube open at both ends | 7.92e-20 | 59 |
blood vessel | 7.92e-20 | 59 |
blood vasculature | 7.92e-20 | 59 |
vascular cord | 7.92e-20 | 59 |
Showing 1 to 10 of 30 entries