FFCP PHASE1:Hg19::chr6:27219295..27219314,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:27219295..27219314,+ to FFCP PHASE1:Hg19::chr6:27219295..27219314,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10279 | |EntrezGene=10279 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9480 | |HGNC=9480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_ENST00000377456_5end | |||
|cluster_id=chr6:27219295..27219314,+ | |||
|description=CAGE_peak_4_at_PRSS16_5end | |||
|id=chr6:27219295..27219314,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.84e-22!254;CL:0002076!6.73e-11!43;CL:0000223!2.73e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.92e-11;42!CL:0002251;6.31e-09;20!CL:0000244;1.18e-07;4!CL:0000731;1.18e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.44e-13,42;CL:0000066,2.00e-11,253;CL:0000223,2.67e-09,58;CL:0002251,6.16e-09,20;CL:0000244,3.38e-08,4;CL:0000731,3.38e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.28e-25!106;DOID:0050687!8.56e-21!143;DOID:162!2.12e-15!235;DOID:14566!2.91e-14!239;DOID:299!4.84e-08!25;DOID:1749!5.00e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.43e-09;14!DOID:299;2.06e-08;25!DOID:0050615;4.75e-08;16!DOID:1324;9.27e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.06e-11,106;DOID:0050687,3.52e-11,143;DOID:1749,2.68e-09,14;DOID:299,1.82e-08,25;DOID:162,2.24e-08,235;DOID:14566,6.08e-08,239;DOID:0050615,8.60e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.02e-18!169;UBERON:0000925!4.02e-18!169;UBERON:0006595!4.02e-18!169;UBERON:0001007!1.17e-13!155;UBERON:0001555!1.17e-13!155;UBERON:0007026!1.17e-13!155;UBERON:0001004!2.08e-13!72;UBERON:0004921!3.87e-12!129;UBERON:0004185!3.87e-12!129;UBERON:0000077!1.29e-11!130;UBERON:0000065!1.95e-11!53;UBERON:0000064!1.03e-10!219;UBERON:0008947!4.35e-10!38;UBERON:0003258!4.35e-10!38;UBERON:0007023!1.18e-09!115;UBERON:0000464!3.44e-09!104;UBERON:0005153!7.37e-09!37;UBERON:0001041!8.83e-09!98;UBERON:0000072!1.01e-08!46;UBERON:0005157!1.28e-08!51;UBERON:0005911!2.01e-08!82;UBERON:0000062!2.22e-07!511;UBERON:0005178!4.85e-07!34;UBERON:0002224!4.85e-07!34;UBERON:0000466!8.35e-07!126;UBERON:0002048!8.63e-07!22;UBERON:0000117!8.63e-07!22;UBERON:0000171!8.63e-07!22;UBERON:0000170!8.63e-07!22;UBERON:0005597!8.63e-07!22;UBERON:0000118!8.63e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;4.89e-09;36!UBERON:0003343;3.16e-08;4!UBERON:0004785;3.16e-08;4!UBERON:0004807;8.07e-08;22!UBERON:0004175;2.60e-07;21!UBERON:0005409;3.29e-07;22!UBERON:0004921;4.25e-07;33!UBERON:0005631;4.81e-07;10!UBERON:0000158;4.81e-07;10!UBERON:0006947;7.57e-07;3!UBERON:0004054;7.57e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.60e-15,160;UBERON:0000925,7.60e-15,160;UBERON:0006595,7.60e-15,160;UBERON:0001007,1.35e-10,145;UBERON:0001555,1.35e-10,145;UBERON:0007026,1.35e-10,145;UBERON:0005911,3.58e-08,82;UBERON:0003343,3.78e-08,4;UBERON:0004785,3.78e-08,4;UBERON:0001004,6.90e-08,74;UBERON:0004921,1.06e-07,118;UBERON:0005156,1.80e-07,59;UBERON:0000990,1.80e-07,59;UBERON:0005153,1.87e-07,37;UBERON:0006947,5.24e-07,3;UBERON:0004054,5.24e-07,3;UBERON:0004175,5.49e-07,25;UBERON:0000160,5.72e-07,17;UBERON:0000161,6.98e-07,36 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.491467873003018,0.697801167972428,1.31064823278103,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.157421562627358,0,0,0.309632246632152,0.919421224478927,0,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.785874452986276,2.91436230634034,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,1.15956511897978,1.36373060295417,0,0.487894824518382,0.662648841607426,0.69716365721711,0.207322110030741,0.504641701751257,0.72995471815166,0,0,0,0,0,0.354920400119532,0.505754070234305,0.723033089650446,0.441175890929576,1.08939722046203,0.474541238222193,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,2.33678033231916,0,1.09750285408626,0,0.603173834469785,1.48141512253647,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0.93733833986777,0.503946384596579,0,0.985143749731331,0.871901815541886,0.766765358330422,0,0.088048434013226,0,1.15295962733569,0.88369703398466,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.606255142892519,0,0.907170879989041,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,1.57117284469109,1.00253235151642,1.65745780084613,0,0,0,0,0.231046011313244,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,1.66215201785745,0.447749509444357,0,0,0.256450125116389,0,0,0.618246069886334,0,0,1.14853107599234,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0.661139661443912,1.34533047155574,1.14851441245126,3.13589120652205,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0.673554789078584,0.670302275535787,0,1.03558180854457,1.72202149068492,1.68471475667626,1.7737206141467,2.06751060186264,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.223676107892416,0.333698283423817,0,0,0,0,0,0,2.43282702530686,0.146508179271894,1.57768678274367,0,0,3.10367830158997,2.37571744666111,5.83605333988541,0.994147647766298,0.844016498463076,0.111308705022906,0.329607748453519,0.422250816255987,0.796991953004279,0.552567831062295,2.01546198283421,0,0.246169610922139,0,0.718946809178615,0.895105873378046,0,0,0,0,0.969332746095218,1.02044907978036,0,0.260427761085233,1.66173999992772,0,0.568967241427498,1.01701460117107,1.18193840883968,0.689486746482929,0.291604613383254,0,0,0,0,0.552896299656123,0.295547618953547,0.438770794307945,3.05027697853172,1.39423744278603,0.615602068030377,0.227884111694002,0.922255617552241,2.15418346583453,3.25942115766024,2.87101043758728,0.641183153813036,2.66517388009317,0,0,0.332423363800313,1.1279783030859,1.17637520590644,1.1747511088309,0.37950746544837,1.90723894776454,0.210998064528027,1.46909527343233,0.141353071433941,1.08194319871046,1.99052386215701,1.50377859655677,1.22206028986725,0.296521128680622,0,0.730953646538188,0.269604531922708,0,0.234264445725339,0,0.586993856796269,0.971121518136371,6.31335044559025,0,0,0.063186579628488,1.50323419414493,0.414752765588989,0,0.661983911750998,0,0,0.853828638089378,0,1.38847790668105,1.07791637155815,1.04471047896483,1.57254001417827,0,0.483781656445426,0.219267951258557,0.328461828212837,0.678923115418936,1.1473296469895,0,0,0.19871461170299,0.949661939338181,0.586654148204409,1.04206466326994,0.85381197895741,0.39961921916426,0.432271251462318,1.25990255782507,0,0.14405479798815,2.23654564017779,0.942776138467182,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.544813624446302,0.803765742325096,0.825236619583403,1.24632101408756,0,0,1.03274246318642,3.68978156359193,0.86686278029118,0.209818352539992,0.528001682597033,1.25501137532991,2.49489756515279,0,0,0,0,0,0,1.19730191562487,0.738832686744051,0,0,0,0,0,0.13223260174269,1.88195521672762,2.11444506695002,0.747511887973863,0.157204305099666,0.828478110694391,0.496166021811951,0,0.365377795142688,0,0,0,0,0,2.82697373250422,0.886068179966986,0.610131324509816,0.500763722825999,0,0.332787154610557,0.0620964029413835,0.415045904808692,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0.28984205722165,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163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| 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| ||
|short_description=p4@PRSS16 | |||
}} | }} |
Latest revision as of 10:34, 17 September 2015
Short description: | p4@PRSS16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRSS16_5end |
Coexpression cluster: | NA |
Association with transcript: | -52bp_to_ENST00000377456_5end |
EntrezGene: | PRSS16 |
HGNC: | 9480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.44e-13 | 42 |
epithelial cell | 2.00e-11 | 253 |
endodermal cell | 2.67e-09 | 58 |
epithelial cell of alimentary canal | 6.16e-09 | 20 |
transitional epithelial cell | 3.38e-08 | 4 |
urothelial cell | 3.38e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.60e-15 | 160 |
endoderm | 7.60e-15 | 160 |
presumptive endoderm | 7.60e-15 | 160 |
digestive system | 1.35e-10 | 145 |
digestive tract | 1.35e-10 | 145 |
primitive gut | 1.35e-10 | 145 |
endo-epithelium | 3.58e-08 | 82 |
mucosa of oral region | 3.78e-08 | 4 |
respiratory system mucosa | 3.78e-08 | 4 |
respiratory system | 6.90e-08 | 74 |
subdivision of digestive tract | 1.06e-07 | 118 |
reproductive structure | 1.80e-07 | 59 |
reproductive system | 1.80e-07 | 59 |
epithelial bud | 1.87e-07 | 37 |
male genital duct | 5.24e-07 | 3 |
internal male genitalia | 5.24e-07 | 3 |
internal genitalia | 5.49e-07 | 25 |
intestine | 5.72e-07 | 17 |
orifice | 6.98e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.06e-11 | 106 |
cell type cancer | 3.52e-11 | 143 |
squamous cell carcinoma | 2.68e-09 | 14 |
adenocarcinoma | 1.82e-08 | 25 |
cancer | 2.24e-08 | 235 |
disease of cellular proliferation | 6.08e-08 | 239 |
respiratory system cancer | 8.60e-08 | 16 |