FFCP PHASE1:Hg19::chr3:191078675..191078686,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:191078675..191078686,+
|short_description=p17@CCDC50
|description=CAGE_peak_17_at_CCDC50_5end
|association_with_transcript=-205bp_to_ENST00000460064_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152137 | |EntrezGene=152137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18111 | |HGNC=18111 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-205bp_to_ENST00000460064_5end | |||
|cluster_id=chr3:191078675..191078686,+ | |||
|description=CAGE_peak_17_at_CCDC50_5end | |||
|id=chr3:191078675..191078686,+ | |||
|ontology_enrichment_celltype=CL:0000076!1.71e-10!62;CL:0002076!2.27e-08!43;CL:0000039!2.63e-08!7;CL:0000586!2.63e-08!7;CL:0002537!5.13e-08!5;CL:0002251!7.48e-08!21;CL:0000066!1.03e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.26e-15;5!CL:0002097;2.85e-10;2!CL:0000349;2.66e-09;19!CL:0002577;2.12e-07;3!CL:0000174;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.21e-15,5;CL:0002097,2.27e-10,2;CL:0000349,2.66e-09,19;CL:0002577,2.19e-07,3;CL:0000174,2.47e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.93e-31!14;DOID:305!5.30e-12!106;DOID:0050687!2.11e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.58e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.63e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.28e-23!12;UBERON:0003729!4.09e-19!5;UBERON:0003343!4.85e-16!4;UBERON:0004785!4.85e-16!4;UBERON:0004923!2.53e-13!57;UBERON:0005631!3.87e-13!14;UBERON:0000158!3.87e-13!14;UBERON:0000478!7.00e-12!24;UBERON:0003124!3.71e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;5.90e-19;4!UBERON:0004785;5.90e-19;4!UBERON:0000974;5.59e-13;6!UBERON:0000478;1.79e-12;24!UBERON:0000305;1.92e-11;7!UBERON:0005631;2.77e-08;10!UBERON:0000158;2.77e-08;10!UBERON:0002369;2.88e-07;3!UBERON:0001235;2.88e-07;3!UBERON:0006858;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,6.18e-19,4;UBERON:0004785,6.18e-19,4;UBERON:0000478,1.71e-12,24;UBERON:0005631,2.09e-12,14;UBERON:0000158,2.09e-12,14;UBERON:0000305,1.87e-11,7;UBERON:0004871,3.85e-10,8;UBERON:0000974,3.76e-08,10;UBERON:0002369,2.47e-07,3;UBERON:0001235,2.47e-07,3;UBERON:0006858,2.47e-07,3;UBERON:0004923,6.01e-07,66 | |||
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| ||
|short_description=p17@CCDC50 | |||
}} | }} |
Latest revision as of 10:39, 17 September 2015
Short description: | p17@CCDC50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CCDC50_5end |
Coexpression cluster: | NA |
Association with transcript: | -205bp_to_ENST00000460064_5end |
EntrezGene: | CCDC50 |
HGNC: | 18111 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.21e-15 | 5 |
cortical cell of adrenal gland | 2.27e-10 | 2 |
extraembryonic cell | 2.66e-09 | 19 |
placental epithelial cell | 2.19e-07 | 3 |
steroid hormone secreting cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 6.18e-19 | 4 |
respiratory system mucosa | 6.18e-19 | 4 |
extraembryonic structure | 1.71e-12 | 24 |
extraembryonic membrane | 2.09e-12 | 14 |
membranous layer | 2.09e-12 | 14 |
amnion | 1.87e-11 | 7 |
somatic layer of lateral plate mesoderm | 3.85e-10 | 8 |
neck | 3.76e-08 | 10 |
adrenal gland | 2.47e-07 | 3 |
adrenal cortex | 2.47e-07 | 3 |
adrenal/interrenal gland | 2.47e-07 | 3 |
organ component layer | 6.01e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.63e-12 | 14 |