FFCP PHASE1:Hg19::chr5:180017732..180017767,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92304 | |EntrezGene=92304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18384 | |HGNC=18384 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=395bp_to_ENST00000512120_5end | |association_with_transcript=395bp_to_ENST00000512120_5end | ||
|cluster_id=chr5:180017732..180017767,- | |||
|coexpression_cluster_id=C365 | |coexpression_cluster_id=C365 | ||
|description=CAGE_peak_3_at_SCGB3A1_5end | |description=CAGE_peak_3_at_SCGB3A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.62e-13;1!UBERON:0006298;3.99e-13;1!UBERON:0006242;4.77e-13;1!UBERON:0008801;5.38e-13;1!UBERON:0004874;6.43e-13;1!UBERON:0006965;3.38e-07;2!UBERON:0008947;7.54e-07;29 | |ontology_enrichment_development_v019=UBERON:0000358;2.62e-13;1!UBERON:0006298;3.99e-13;1!UBERON:0006242;4.77e-13;1!UBERON:0008801;5.38e-13;1!UBERON:0004874;6.43e-13;1!UBERON:0006965;3.38e-07;2!UBERON:0008947;7.54e-07;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.13e-17!115;UBERON:0003127!6.92e-10!2;UBERON:0000341!8.19e-10!2;UBERON:0001829!1.30e-09!2;UBERON:0000078!1.10e-07!18;UBERON:0001044!6.58e-07!6;UBERON:0003293!6.58e-07!6;UBERON:0003294!6.58e-07!6;UBERON:0010047!6.58e-07!6;UBERON:0000167!6.58e-07!6;UBERON:0001004!7.50e-07!72 | |ontology_enrichment_uberon=UBERON:0007023!4.13e-17!115;UBERON:0003127!6.92e-10!2;UBERON:0000341!8.19e-10!2;UBERON:0001829!1.30e-09!2;UBERON:0000078!1.10e-07!18;UBERON:0001044!6.58e-07!6;UBERON:0003293!6.58e-07!6;UBERON:0003294!6.58e-07!6;UBERON:0010047!6.58e-07!6;UBERON:0000167!6.58e-07!6;UBERON:0001004!7.50e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.89e-25;2!UBERON:0000341;6.29e-25;2!UBERON:0001829;2.48e-24;2!UBERON:0001044;5.62e-18;6!UBERON:0003293;5.62e-18;6!UBERON:0003294;5.62e-18;6!UBERON:0010047;5.62e-18;6!UBERON:0003408;5.62e-18;6!UBERON:0000167;5.62e-18;6!UBERON:0002171;2.32e-13;1!UBERON:0006518;2.32e-13;1!UBERON:0008949;2.32e-13;1!UBERON:0000101;2.32e-13;1!UBERON:0002167;2.32e-13;1!UBERON:0001736;3.99e-13;1!UBERON:0001831;5.38e-13;1!UBERON:0001567;5.38e-13;1!UBERON:0007029;6.43e-13;1!UBERON:0000989;6.43e-13;1!UBERON:0008811;6.43e-13;1!UBERON:0000974;6.02e-09;6!UBERON:0001041;4.94e-08;14!UBERON:0003126;7.55e-08;7!UBERON:0001005;7.55e-08;7!UBERON:0004089;3.93e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003127;3.89e-25;2!UBERON:0000341;6.29e-25;2!UBERON:0001829;2.48e-24;2!UBERON:0001044;5.62e-18;6!UBERON:0003293;5.62e-18;6!UBERON:0003294;5.62e-18;6!UBERON:0010047;5.62e-18;6!UBERON:0003408;5.62e-18;6!UBERON:0000167;5.62e-18;6!UBERON:0002171;2.32e-13;1!UBERON:0006518;2.32e-13;1!UBERON:0008949;2.32e-13;1!UBERON:0000101;2.32e-13;1!UBERON:0002167;2.32e-13;1!UBERON:0001736;3.99e-13;1!UBERON:0001831;5.38e-13;1!UBERON:0001567;5.38e-13;1!UBERON:0007029;6.43e-13;1!UBERON:0000989;6.43e-13;1!UBERON:0008811;6.43e-13;1!UBERON:0000974;6.02e-09;6!UBERON:0001041;4.94e-08;14!UBERON:0003126;7.55e-08;7!UBERON:0001005;7.55e-08;7!UBERON:0004089;3.93e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.89e-25,2;UBERON:0000341,6.29e-25,2;UBERON:0001829,2.34e-24,2;UBERON:0001044,5.62e-18,6;UBERON:0003293,5.62e-18,6;UBERON:0003294,5.62e-18,6;UBERON:0010047,5.62e-18,6;UBERON:0000167,5.62e-18,6;UBERON:0002171,2.32e-13,1;UBERON:0006518,2.32e-13,1;UBERON:0008949,2.32e-13,1;UBERON:0000101,2.32e-13,1;UBERON:0002167,2.32e-13,1;UBERON:0001736,3.76e-13,1;UBERON:0006298,3.76e-13,1;UBERON:0001831,5.38e-13,1;UBERON:0001567,5.38e-13,1;UBERON:0008801,5.38e-13,1;UBERON:0007029,6.06e-13,1;UBERON:0000989,6.82e-13,1;UBERON:0008811,6.82e-13,1;UBERON:0006258,6.82e-13,1;UBERON:0005876,6.82e-13,1;UBERON:0004874,6.82e-13,1;UBERON:0003408,4.95e-11,10;UBERON:0007023,5.35e-11,114;UBERON:0003126,7.55e-08,7;UBERON:0001005,7.55e-08,7;UBERON:0001004,3.33e-07,74;UBERON:0004089,3.93e-07,2 | |||
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| ||
|short_description=p3@SCGB3A1 | |short_description=p3@SCGB3A1 | ||
}} | }} |
Latest revision as of 10:40, 17 September 2015
Short description: | p3@SCGB3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCGB3A1_5end |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | 395bp_to_ENST00000512120_5end |
EntrezGene: | SCGB3A1 |
HGNC: | 18384 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 3.89e-25 | 2 |
throat | 6.29e-25 | 2 |
major salivary gland | 2.34e-24 | 2 |
saliva-secreting gland | 5.62e-18 | 6 |
gland of oral region | 5.62e-18 | 6 |
gland of foregut | 5.62e-18 | 6 |
oral gland | 5.62e-18 | 6 |
oral cavity | 5.62e-18 | 6 |
lower lobe of right lung | 2.32e-13 | 1 |
right lung lobe | 2.32e-13 | 1 |
lower lobe of lung | 2.32e-13 | 1 |
lobe of lung | 2.32e-13 | 1 |
right lung | 2.32e-13 | 1 |
submandibular gland | 3.76e-13 | 1 |
submandibular gland primordium | 3.76e-13 | 1 |
parotid gland | 5.38e-13 | 1 |
cheek | 5.38e-13 | 1 |
parotid gland primordium | 5.38e-13 | 1 |
surface | 6.06e-13 | 1 |
penis | 6.82e-13 | 1 |
intromittent organ | 6.82e-13 | 1 |
lateral plate mesenchyme | 6.82e-13 | 1 |
undifferentiated genital tubercle | 6.82e-13 | 1 |
somatopleure | 6.82e-13 | 1 |
gland of gut | 4.95e-11 | 10 |
adult organism | 5.35e-11 | 114 |
trachea | 7.55e-08 | 7 |
respiratory airway | 7.55e-08 | 7 |
respiratory system | 3.33e-07 | 74 |
midface | 3.93e-07 | 2 |