FFCP PHASE1:Hg19::chr6:28092375..28092412,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80345 | |EntrezGene=80345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20813 | |HGNC=20813 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H4T2 | |UniProt=Q9H4T2 | ||
|association_with_transcript=0bp_to_NM_025231,uc003nkm.2,uc011dky.1_5end | |association_with_transcript=0bp_to_NM_025231,uc003nkm.2,uc011dky.1_5end | ||
|cluster_id=chr6:28092375..28092412,+ | |||
|description=CAGE_peak_1_at_ZSCAN16_5end | |description=CAGE_peak_1_at_ZSCAN16_5end | ||
|id=chr6:28092375..28092412,+ | |id=chr6:28092375..28092412,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.89e-21!140;CL:0000037!4.71e-18!172;CL:0000566!4.71e-18!172;CL:0002032!1.61e-16!165;CL:0000837!1.61e-16!165;CL:0000988!3.05e-16!182;CL:0002031!7.45e-16!124;CL:0002087!1.39e-15!119;CL:0000838!8.20e-14!52;CL:0000542!8.68e-14!53;CL:0000051!8.68e-14!53;CL:0000791!2.16e-08!18;CL:0000789!2.16e-08!18;CL:0002420!2.16e-08!18;CL:0002419!2.16e-08!18;CL:0000790!2.16e-08!18;CL:0000236!2.72e-08!14;CL:0000945!8.13e-08!24;CL:0000826!8.13e-08!24;CL:0000766!3.43e-07!76 | |ontology_enrichment_celltype=CL:0000738!3.89e-21!140;CL:0000037!4.71e-18!172;CL:0000566!4.71e-18!172;CL:0002032!1.61e-16!165;CL:0000837!1.61e-16!165;CL:0000988!3.05e-16!182;CL:0002031!7.45e-16!124;CL:0002087!1.39e-15!119;CL:0000838!8.20e-14!52;CL:0000542!8.68e-14!53;CL:0000051!8.68e-14!53;CL:0000791!2.16e-08!18;CL:0000789!2.16e-08!18;CL:0002420!2.16e-08!18;CL:0002419!2.16e-08!18;CL:0000790!2.16e-08!18;CL:0000236!2.72e-08!14;CL:0000945!8.13e-08!24;CL:0000826!8.13e-08!24;CL:0000766!3.43e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000542;4.88e-09;53!CL:0000791;1.66e-08;18!CL:0000789;1.66e-08;18!CL:0002419;1.66e-08;18!CL:0000236;1.80e-08;13!CL:0000945;5.89e-08;24!CL:0000625;9.29e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.48e-21,136;CL:0000037,2.82e-18,168;CL:0000988,9.34e-17,177;CL:0002032,1.00e-16,161;CL:0000837,1.00e-16,161;CL:0002031,5.47e-16,120;CL:0002087,1.00e-15,115;CL:0000838,4.68e-14,52;CL:0000542,4.98e-14,53;CL:0000051,4.98e-14,53;CL:0000791,1.97e-08,18;CL:0000789,1.97e-08,18;CL:0002420,1.97e-08,18;CL:0002419,1.97e-08,18;CL:0000790,1.97e-08,18;CL:0000236,2.48e-08,14;CL:0000945,7.48e-08,24;CL:0000826,7.48e-08,24;CL:0000766,3.95e-07,72;CL:0000625,9.98e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;4.88e-09;53!CL:0000790;1.66e-08;18 | |||
|ontology_enrichment_disease=DOID:305!6.40e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.12e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.14e-08!112;UBERON:0002390!5.82e-08!102;UBERON:0003061!5.82e-08!102;UBERON:0000178!1.57e-07!15;UBERON:0000179!1.57e-07!15;UBERON:0000463!1.57e-07!15 | |ontology_enrichment_uberon=UBERON:0002193!1.14e-08!112;UBERON:0002390!5.82e-08!102;UBERON:0003061!5.82e-08!102;UBERON:0000178!1.57e-07!15;UBERON:0000179!1.57e-07!15;UBERON:0000463!1.57e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.25e-07;15!UBERON:0000179;1.25e-07;15!UBERON:0000463;1.25e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.96e-09,108;UBERON:0002390,5.06e-08,98;UBERON:0003061,5.06e-08,98;UBERON:0000178,1.45e-07,15;UBERON:0000179,1.45e-07,15;UBERON:0000463,1.45e-07,15 | |||
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| ||
|short_description=p1@ZSCAN16 | |short_description=p1@ZSCAN16 | ||
}} | }} |
Latest revision as of 11:51, 17 September 2015
Short description: | p1@ZSCAN16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZSCAN16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_025231, uc003nkm.2, uc011dky.1_5end |
EntrezGene: | ZSCAN16 |
HGNC: | 20813 |
UniProt: | Q9H4T2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.48e-21 | 136 |
hematopoietic stem cell | 2.82e-18 | 168 |
hematopoietic cell | 9.34e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.00e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.00e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 5.47e-16 | 120 |
nongranular leukocyte | 1.00e-15 | 115 |
lymphoid lineage restricted progenitor cell | 4.68e-14 | 52 |
lymphocyte | 4.98e-14 | 53 |
common lymphoid progenitor | 4.98e-14 | 53 |
mature alpha-beta T cell | 1.97e-08 | 18 |
alpha-beta T cell | 1.97e-08 | 18 |
immature T cell | 1.97e-08 | 18 |
mature T cell | 1.97e-08 | 18 |
immature alpha-beta T cell | 1.97e-08 | 18 |
B cell | 2.48e-08 | 14 |
lymphocyte of B lineage | 7.48e-08 | 24 |
pro-B cell | 7.48e-08 | 24 |
myeloid leukocyte | 3.95e-07 | 72 |
CD8-positive, alpha-beta T cell | 9.98e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.96e-09 | 108 |
hematopoietic system | 5.06e-08 | 98 |
blood island | 5.06e-08 | 98 |
blood | 1.45e-07 | 15 |
haemolymphatic fluid | 1.45e-07 | 15 |
organism substance | 1.45e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.12e-07 | 106 |