FFCP PHASE1:Hg19::chr1:155294335..155294340,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23623 | |EntrezGene=23623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17153 | |HGNC=17153 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000471876_5end | |association_with_transcript=5bp_to_ENST00000471876_5end | ||
|cluster_id=chr1:155294335..155294340,+ | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_16_at_RUSC1_5end | |description=CAGE_peak_16_at_RUSC1_5end | ||
|id=chr1:155294335..155294340,+ | |id=chr1:155294335..155294340,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.32e-16!254;CL:0002368!4.55e-08!13;CL:0000223!1.90e-07!59 | |ontology_enrichment_celltype=CL:0000066!5.32e-16!254;CL:0002368!4.55e-08!13;CL:0000223!1.90e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002577;3.58e-15;3!CL:0000167;8.17e-12;1!CL:0000164;8.17e-12;1!CL:0000502;8.17e-12;1!CL:0000172;8.17e-12;1!CL:0000173;8.17e-12;1!CL:1000449;1.64e-11;15!CL:1000497;3.51e-10;17!CL:0002518;3.51e-10;17!CL:1000507;3.98e-10;10!CL:1000494;3.98e-10;10!CL:1000746;6.77e-07;7!CL:1000612;6.77e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.80e-15,3;CL:0000167,1.19e-11,1;CL:0000164,1.19e-11,1;CL:0000502,1.19e-11,1;CL:0000172,1.19e-11,1;CL:0000173,1.19e-11,1;CL:0002351,1.19e-11,1;CL:1000449,1.81e-11,15;CL:1000497,3.82e-10,17;CL:0002518,3.82e-10,17;CL:1000507,4.38e-10,10;CL:1000494,4.38e-10,10;CL:0000066,4.49e-07,253;CL:1000746,8.59e-07,7;CL:1000612,8.59e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002351;8.17e-12;1!UBERON:0008425;8.17e-12;1 | |||
|ontology_enrichment_disease=DOID:305!1.52e-07!106 | |ontology_enrichment_disease=DOID:305!1.52e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4430;8.17e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.19e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.42e-14!169;UBERON:0000925!3.42e-14!169;UBERON:0006595!3.42e-14!169;UBERON:0001007!2.09e-10!155;UBERON:0001555!2.09e-10!155;UBERON:0007026!2.09e-10!155;UBERON:0006554!9.84e-09!44;UBERON:0000077!1.78e-08!130;UBERON:0001008!2.56e-08!45;UBERON:0003102!7.08e-08!95;UBERON:0003104!1.16e-07!238;UBERON:0009142!1.16e-07!238;UBERON:0001004!1.22e-07!72;UBERON:0002100!2.85e-07!216;UBERON:0004921!4.61e-07!129;UBERON:0004185!4.61e-07!129;UBERON:0000161!9.65e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!3.42e-14!169;UBERON:0000925!3.42e-14!169;UBERON:0006595!3.42e-14!169;UBERON:0001007!2.09e-10!155;UBERON:0001555!2.09e-10!155;UBERON:0007026!2.09e-10!155;UBERON:0006554!9.84e-09!44;UBERON:0000077!1.78e-08!130;UBERON:0001008!2.56e-08!45;UBERON:0003102!7.08e-08!95;UBERON:0003104!1.16e-07!238;UBERON:0009142!1.16e-07!238;UBERON:0001004!1.22e-07!72;UBERON:0002100!2.85e-07!216;UBERON:0004921!4.61e-07!129;UBERON:0004185!4.61e-07!129;UBERON:0000161!9.65e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.29e-11;4!UBERON:0006555;1.64e-11;15!UBERON:0004819;1.64e-11;15!UBERON:0001285;1.64e-11;15!UBERON:0007684;1.64e-11;15!UBERON:0004211;3.98e-10;10!UBERON:0009773;3.98e-10;10!UBERON:0001231;3.98e-10;10!UBERON:0004810;3.98e-10;10!UBERON:0002113;2.92e-07;24!UBERON:0011143;2.92e-07;24!UBERON:0000074;6.77e-07;7!UBERON:0001229;6.77e-07;7!UBERON:0000353;7.88e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.07e-11,4;UBERON:0004340,1.07e-11,4;UBERON:0004211,1.81e-11,15;UBERON:0009773,1.81e-11,15;UBERON:0001231,1.81e-11,15;UBERON:0001285,1.81e-11,15;UBERON:0007684,1.81e-11,15;UBERON:0004208,1.81e-11,15;UBERON:0006555,9.14e-11,16;UBERON:0004819,9.14e-11,16;UBERON:0004810,4.38e-10,10;UBERON:0006554,1.03e-07,47;UBERON:0001008,1.52e-07,48;UBERON:0003124,4.74e-07,7;UBERON:0010532,8.59e-07,7;UBERON:0000074,8.59e-07,7;UBERON:0001229,8.59e-07,7;UBERON:0001230,8.59e-07,7;UBERON:0003220,8.59e-07,7;UBERON:0005749,8.59e-07,7;UBERON:0004199,8.59e-07,7;UBERON:0004209,8.59e-07,7;UBERON:0004198,8.59e-07,7;UBERON:0000353,9.17e-07,15 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0.587200878669695,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,1.09288586487763,0.741568885568859,0,0,0.398873881556595,0,0,0,0,0,0,1.13061588384802,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,0,0,0,0,0.323745888736263,0.280901613404497,0,0.245668634623536,0.103325781175765,1.18800285728205,0.247266929278557,0.910161361938026,0,0.336672227908132,0.250237039743928,0.554128230968366,0,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0,0.201504196455281,0,0.57978255948989,0.272746120590835,0.573609190778008,0.243947412259191,0,0.116193942869518,0,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0,0.738155454624648,1.40241773803446,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.301586917234893,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,0,0,0.514414748524284,1.41849132023278,0.799266537048298,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.391602314925481,0,0,0,0,1.5156378572313,3.32870879020994,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.483437798366489,0.601519410909855,0,0.34444334449382,0.364182336013434,0,0,0.0770153371044148,1.56869953835371,4.38417673959782,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0,0,0.325378394664303,0,0.732555718546747,0.82509499920588,0,1.30012049207304,0,0.096670718292122,0.308097234229289,0,0.275673144969061,0.214840489736547,0,0.0852266274161009,0.178064071293475,0.826424576804891,0.192190067365106,0.765676274967505,0.30347334256665,0,0,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.235624804691373,0.404364963146632,0,0.421258456238981,0.975267478179181,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0.699869440489966,0.384888450902048,0.670302275535787,1.08890984861323,0,0.86101074534246,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0.276283915531148,0,0.20453736500431,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,1.66173999992772,0,0.455173793141999,0.254253650292766,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.269272933229316,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0.167821586975843,0,0,0.421996129056054,0,0.141353071433941,0,1.99052386215701,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0.207376382794494,0.664653872707185,0.330991955875499,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0.17472666824203,0,0.19351266257817,0.730893170861856,0.492692742319255,0.290967049465258,0.176512253383001,0,0.137041924646751,0,0,0.586654148204409,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0.235694034616795,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,0.482259445395058,0.550157746388935,0,0,0,0,0.670869375198532,0.315222829196793,0.157363764404994,0,0.179287339332845,0,0,0,0.5085370753095,0,0,0,0,0,0.5111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| |phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0.587200878669695,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,1.09288586487763,0.741568885568859,0,0,0.398873881556595,0,0,0,0,0,0,1.13061588384802,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,0,0,0,0,0.323745888736263,0.280901613404497,0,0.245668634623536,0.103325781175765,1.18800285728205,0.247266929278557,0.910161361938026,0,0.336672227908132,0.250237039743928,0.554128230968366,0,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0,0.201504196455281,0,0.57978255948989,0.272746120590835,0.573609190778008,0.243947412259191,0,0.116193942869518,0,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0,0.738155454624648,1.40241773803446,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.301586917234893,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,0,0,0.514414748524284,1.41849132023278,0.799266537048298,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.391602314925481,0,0,0,0,1.5156378572313,3.32870879020994,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.483437798366489,0.601519410909855,0,0.34444334449382,0.364182336013434,0,0,0.0770153371044148,1.56869953835371,4.38417673959782,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0,0,0.325378394664303,0,0.732555718546747,0.82509499920588,0,1.30012049207304,0,0.096670718292122,0.308097234229289,0,0.275673144969061,0.214840489736547,0,0.0852266274161009,0.178064071293475,0.826424576804891,0.192190067365106,0.765676274967505,0.30347334256665,0,0,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.235624804691373,0.404364963146632,0,0.421258456238981,0.975267478179181,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0.699869440489966,0.384888450902048,0.670302275535787,1.08890984861323,0,0.86101074534246,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0.276283915531148,0,0.20453736500431,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,1.66173999992772,0,0.455173793141999,0.254253650292766,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.269272933229316,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0.167821586975843,0,0,0.421996129056054,0,0.141353071433941,0,1.99052386215701,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0.207376382794494,0.664653872707185,0.330991955875499,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0.17472666824203,0,0.19351266257817,0.730893170861856,0.492692742319255,0.290967049465258,0.176512253383001,0,0.137041924646751,0,0,0.586654148204409,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0.235694034616795,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,0.482259445395058,0.550157746388935,0,0,0,0,0.670869375198532,0.315222829196793,0.157363764404994,0,0.179287339332845,0,0,0,0.5085370753095,0,0,0,0,0,0.5111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| ||
|short_description=p16@RUSC1 | |short_description=p16@RUSC1 | ||
}} | }} |
Latest revision as of 12:41, 17 September 2015
Short description: | p16@RUSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RUSC1_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | 5bp_to_ENST00000471876_5end |
EntrezGene: | RUSC1 |
HGNC: | 17153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.80e-15 | 3 |
peptide hormone secreting cell | 1.19e-11 | 1 |
enteroendocrine cell | 1.19e-11 | 1 |
type D enteroendocrine cell | 1.19e-11 | 1 |
somatostatin secreting cell | 1.19e-11 | 1 |
pancreatic D cell | 1.19e-11 | 1 |
progenitor cell of endocrine pancreas | 1.19e-11 | 1 |
epithelial cell of nephron | 1.81e-11 | 15 |
kidney cell | 3.82e-10 | 17 |
kidney epithelial cell | 3.82e-10 | 17 |
kidney tubule cell | 4.38e-10 | 10 |
nephron tubule epithelial cell | 4.38e-10 | 10 |
epithelial cell | 4.49e-07 | 253 |
glomerular cell | 8.59e-07 | 7 |
kidney corpuscule cell | 8.59e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.07e-11 | 4 |
allantois | 1.07e-11 | 4 |
nephron epithelium | 1.81e-11 | 15 |
renal tubule | 1.81e-11 | 15 |
nephron tubule | 1.81e-11 | 15 |
nephron | 1.81e-11 | 15 |
uriniferous tubule | 1.81e-11 | 15 |
nephrogenic mesenchyme | 1.81e-11 | 15 |
excretory tube | 9.14e-11 | 16 |
kidney epithelium | 9.14e-11 | 16 |
nephron tubule epithelium | 4.38e-10 | 10 |
urinary system structure | 1.03e-07 | 47 |
renal system | 1.52e-07 | 48 |
chorion | 4.74e-07 | 7 |
primitive nephron | 8.59e-07 | 7 |
renal glomerulus | 8.59e-07 | 7 |
renal corpuscle | 8.59e-07 | 7 |
glomerular capsule | 8.59e-07 | 7 |
metanephric mesenchyme | 8.59e-07 | 7 |
glomerular tuft | 8.59e-07 | 7 |
S-shaped body | 8.59e-07 | 7 |
renal vesicle | 8.59e-07 | 7 |
comma-shaped body | 8.59e-07 | 7 |
parenchyma | 9.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.19e-11 | 1 |