FFCP PHASE1:Hg19::chr19:36246007..36246015,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126393 | |EntrezGene=126393 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=26511 | |HGNC=26511 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=191bp_to_AK026458_5end | |association_with_transcript=191bp_to_AK026458_5end | ||
|cluster_id=chr19:36246007..36246015,- | |||
|coexpression_cluster_id=C339 | |||
|description=CAGE_peak_19_at_HSPB6_5end | |description=CAGE_peak_19_at_HSPB6_5end | ||
|id=chr19:36246007..36246015,- | |id=chr19:36246007..36246015,- | ||
|ontology_enrichment_celltype=CL:0000055!4.48e-13!180;CL:0000057!5.35e-11!75;CL:0000187!2.28e-09!54;CL:0000680!2.05e-08!57;CL:0000056!2.05e-08!57;CL:0000355!2.05e-08!57;CL:0000183!7.66e-08!59;CL:0000393!1.42e-07!60;CL:0000211!1.42e-07!60 | |ontology_enrichment_celltype=CL:0000055!4.48e-13!180;CL:0000057!5.35e-11!75;CL:0000187!2.28e-09!54;CL:0000680!2.05e-08!57;CL:0000056!2.05e-08!57;CL:0000355!2.05e-08!57;CL:0000183!7.66e-08!59;CL:0000393!1.42e-07!60;CL:0000211!1.42e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.07e-09;4!UBERON:0007284;1.07e-09;4!UBERON:0006603;9.87e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;5.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.40e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.85e-15!115;UBERON:0002385!2.02e-11!63;UBERON:0001015!2.02e-11!63;UBERON:0000383!2.02e-11!63;UBERON:0001134!4.39e-11!61;UBERON:0002036!4.39e-11!61;UBERON:0003082!4.39e-11!61;UBERON:0004290!9.81e-11!70;UBERON:0000914!1.73e-10!83;UBERON:0002329!1.73e-10!83;UBERON:0003077!1.73e-10!83;UBERON:0003059!1.73e-10!83;UBERON:0007282!1.73e-10!83;UBERON:0009618!1.73e-10!83;UBERON:0007285!1.73e-10!83;UBERON:0000475!1.48e-09!365;UBERON:0005256!3.12e-09!143;UBERON:0007100!3.48e-09!27;UBERON:0000486!3.29e-08!82;UBERON:0004872!2.51e-07!84;UBERON:0000481!2.65e-07!347;UBERON:0003103!4.89e-07!69;UBERON:0002100!6.05e-07!216;UBERON:0000948!7.77e-07!24;UBERON:0005498!7.77e-07!24;UBERON:0004140!7.77e-07!24;UBERON:0009881!7.77e-07!24;UBERON:0004141!7.77e-07!24;UBERON:0003084!7.77e-07!24;UBERON:0007005!7.77e-07!24;UBERON:0004139!7.77e-07!24;UBERON:0004291!7.77e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;8.74e-13;3!UBERON:0000946;8.74e-13;3!UBERON:0005090;1.73e-09;2!UBERON:0001630;1.73e-09;2!UBERON:0005904;4.74e-09;4!UBERON:0002133;5.17e-09;2!UBERON:0007100;6.01e-09;25!UBERON:0002385;9.96e-07;31!UBERON:0001015;9.96e-07;31!UBERON:0000383;9.96e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,5.02e-13,3;UBERON:0009751,5.02e-13,3;UBERON:0000946,5.02e-13,3;UBERON:0002523,5.02e-13,3;UBERON:0005983,5.02e-13,3;UBERON:0002165,5.02e-13,3;UBERON:0002062,5.02e-13,3;UBERON:0007280,5.02e-13,3;UBERON:0003104,1.95e-12,160;UBERON:0009142,1.95e-12,160;UBERON:0007100,2.29e-10,27;UBERON:0005090,1.74e-09,2;UBERON:0001630,1.74e-09,2;UBERON:0004797,2.83e-09,7;UBERON:0005904,2.97e-09,4;UBERON:0002133,3.47e-09,2;UBERON:0005256,3.83e-09,122;UBERON:0003103,2.92e-08,68;UBERON:0000926,9.95e-08,315;UBERON:0004120,9.95e-08,315;UBERON:0006603,9.95e-08,315;UBERON:0002385,1.06e-07,64;UBERON:0001015,1.06e-07,64;UBERON:0000383,1.06e-07,64;UBERON:0007023,6.17e-07,114;UBERON:0001134,9.31e-07,62;UBERON:0002036,9.31e-07,62;UBERON:0003082,9.31e-07,62 | |||
|phase1_expression=0,0.856402095563933,1.12763523276777,0,0.446961094427288,0,0,0,3.3954131665979,0,0,0,0,0.37129905888014,0.662794751455832,1.34465029290355,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0.670700859703636,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0.286836620748814,1.06400514659507,0.560677600142307,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0.312160076830321,1.71141546463335,0.448346041655403,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.340296549480063,0,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0.285826432630578,0,0,0.07333828582095,0,3.57656445851882,0,0.531876233169741,1.04007436911366,0,0,0,1.57275793023962,1.08524321078289,0,0,0.710783897485092,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,2.50085260529839,1.35632511849868,0,0,0,0,0,2.27407504055985,0,0,0.553107505625109,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.561320188866147,1.53766979106841,0,0.804269605718038,0,0.616838775210622,0.532685175939381,0.246381468041427,1.55776328755086,0.581051892299796,0,0,0,0.114814448164607,0.364182336013434,0.786746489756545,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0.214840489736547,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0,0,4.18360994367557,0.31481234683064,0,1.23213432070436,0,0,0,0,0,0,1.14378116354295,0.255897791311334,16.6896205333229,0.636406495851874,0,0.179872457583315,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,2.26016233240486,0.551365343546124,0,0.438450885253763,1.73632660280006,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,0.709522128141196,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.796991953004279,0.552567831062295,0,0,0,0.311039587661807,0,0,0,1.479651084554,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,2.40773294189637,0.234264445725339,0,0,0,1.97292201424695,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0.343972064943233,0,0,0,0.969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,2.7499250881402,3.58936512288407,1.39775300349294,3.004582336956,1.11585728720936,0.671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,1.32418394073086,0,4.3439968140297,0,2.61269888087527,0,0,0.170388021785422,0,0,0,0.517131825446202,0.13223260174269,0,0,0.427149650270779,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.655745261419609,0,0,0.122026264901963,0.3755727921195,0,0,0.434674820589684,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.378806010550178,0,0,0.228840068396924,0.907385542579434,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,1.12815492523886,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0.992422356778588,0,0,0.535701835878287,0.336283722218824,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0.706437835654626,0,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,15.5382920925095,2.56657017140618,1.1598144313382,0,0,0.198950775161368,0,0,0,0,0,0.437119121007915,0,1.96118657403124,0,0.196308467114945,0,0.4226557275834,0.849635573439084,0,0,0,0,0,0,1.46067277649303,0,0,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,2.13233981900981,0.23806443146374,0.0645889098360061,0,0,0.12729431655633,0.606351566874658,2.8303177226605,2.39563310759697,0.134704106029175,0.286888821570705,0.332660356546013,0,0,1.9307228228694,0,2.34640942403454,0.488965776731466,0.813792356631477,1.33151354837103,0.805095174364105,0 | |phase1_expression=0,0.856402095563933,1.12763523276777,0,0.446961094427288,0,0,0,3.3954131665979,0,0,0,0,0.37129905888014,0.662794751455832,1.34465029290355,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0.670700859703636,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0.286836620748814,1.06400514659507,0.560677600142307,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0.312160076830321,1.71141546463335,0.448346041655403,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.340296549480063,0,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0.285826432630578,0,0,0.07333828582095,0,3.57656445851882,0,0.531876233169741,1.04007436911366,0,0,0,1.57275793023962,1.08524321078289,0,0,0.710783897485092,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,2.50085260529839,1.35632511849868,0,0,0,0,0,2.27407504055985,0,0,0.553107505625109,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.561320188866147,1.53766979106841,0,0.804269605718038,0,0.616838775210622,0.532685175939381,0.246381468041427,1.55776328755086,0.581051892299796,0,0,0,0.114814448164607,0.364182336013434,0.786746489756545,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0.214840489736547,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0,0,4.18360994367557,0.31481234683064,0,1.23213432070436,0,0,0,0,0,0,1.14378116354295,0.255897791311334,16.6896205333229,0.636406495851874,0,0.179872457583315,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,2.26016233240486,0.551365343546124,0,0.438450885253763,1.73632660280006,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,0.709522128141196,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.796991953004279,0.552567831062295,0,0,0,0.311039587661807,0,0,0,1.479651084554,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,2.40773294189637,0.234264445725339,0,0,0,1.97292201424695,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0.343972064943233,0,0,0,0.969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,2.7499250881402,3.58936512288407,1.39775300349294,3.004582336956,1.11585728720936,0.671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,1.32418394073086,0,4.3439968140297,0,2.61269888087527,0,0,0.170388021785422,0,0,0,0.517131825446202,0.13223260174269,0,0,0.427149650270779,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.655745261419609,0,0,0.122026264901963,0.3755727921195,0,0,0.434674820589684,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.378806010550178,0,0,0.228840068396924,0.907385542579434,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,1.12815492523886,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0.992422356778588,0,0,0.535701835878287,0.336283722218824,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0.706437835654626,0,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,15.5382920925095,2.56657017140618,1.1598144313382,0,0,0.198950775161368,0,0,0,0,0,0.437119121007915,0,1.96118657403124,0,0.196308467114945,0,0.4226557275834,0.849635573439084,0,0,0,0,0,0,1.46067277649303,0,0,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,2.13233981900981,0.23806443146374,0.0645889098360061,0,0,0.12729431655633,0.606351566874658,2.8303177226605,2.39563310759697,0.134704106029175,0.286888821570705,0.332660356546013,0,0,1.9307228228694,0,2.34640942403454,0.488965776731466,0.813792356631477,1.33151354837103,0.805095174364105,0 | ||
|short_description=p19@HSPB6 | |short_description=p19@HSPB6 | ||
}} | }} |
Latest revision as of 13:29, 17 September 2015
Short description: | p19@HSPB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_HSPB6_5end |
Coexpression cluster: | C339_Mesenchymal_heart_leiomyoma_Adipocyte_Smooth_skeletal_tongue |
Association with transcript: | 191bp_to_AK026458_5end |
EntrezGene: | HSPB6 |
HGNC: | 26511 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 5.02e-13 | 3 |
cardiac mesenchyme | 5.02e-13 | 3 |
cardial valve | 5.02e-13 | 3 |
tunica intima | 5.02e-13 | 3 |
heart layer | 5.02e-13 | 3 |
endocardium | 5.02e-13 | 3 |
endocardial cushion | 5.02e-13 | 3 |
presumptive endocardium | 5.02e-13 | 3 |
mesenchyme | 1.95e-12 | 160 |
entire embryonic mesenchyme | 1.95e-12 | 160 |
primary circulatory organ | 2.29e-10 | 27 |
muscle structure | 1.74e-09 | 2 |
muscle organ | 1.74e-09 | 2 |
blood vessel layer | 2.83e-09 | 7 |
duct of male reproductive system | 2.97e-09 | 4 |
atrioventricular valve | 3.47e-09 | 2 |
trunk mesenchyme | 3.83e-09 | 122 |
compound organ | 2.92e-08 | 68 |
mesoderm | 9.95e-08 | 315 |
mesoderm-derived structure | 9.95e-08 | 315 |
presumptive mesoderm | 9.95e-08 | 315 |
muscle tissue | 1.06e-07 | 64 |
musculature | 1.06e-07 | 64 |
musculature of body | 1.06e-07 | 64 |
adult organism | 6.17e-07 | 114 |
skeletal muscle tissue | 9.31e-07 | 62 |
striated muscle tissue | 9.31e-07 | 62 |
myotome | 9.31e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.40e-09 | 2 |