FFCP PHASE1:Hg19::chr1:156095955..156095981,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:156095955..156095981,+
|short_description=p13@LMNA
|description=CAGE_peak_13_at_LMNA_5end
|association_with_transcript=0bp_to_ENST00000368297,ENST000005154...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4000 | |EntrezGene=4000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6636 | |HGNC=6636 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TCI8,D6RB20 | |UniProt=Q5TCI8,D6RB20 | ||
|association_with_transcript=0bp_to_ENST00000368297,ENST00000515459,uc001fnj.2,uc010pgz.1_5end | |||
|cluster_id=chr1:156095955..156095981,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_13_at_LMNA_5end | |||
|id=chr1:156095955..156095981,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.47e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.53e-15!235;DOID:14566!2.33e-14!239;DOID:2531!3.04e-12!51;DOID:0060083!3.04e-12!51;DOID:0050686!4.98e-12!137;DOID:3095!6.88e-11!22;DOID:2994!6.88e-11!22;DOID:1240!2.05e-08!39;DOID:8692!2.34e-08!31;DOID:0050687!9.18e-08!143;DOID:171!2.63e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.55e-11;31!DOID:171;1.89e-09;10!DOID:4468;1.97e-09;2!DOID:1036;6.57e-08;8!DOID:1240;6.71e-08;39!DOID:3095;8.22e-08;22!DOID:2994;8.22e-08;22!DOID:2531;8.53e-08;51!DOID:0060083;8.53e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.02e-13,235;DOID:14566,2.92e-13,239;DOID:2531,3.19e-12,51;DOID:0060083,3.19e-12,51;DOID:0050686,3.48e-12,137;DOID:8692,7.30e-11,31;DOID:1240,4.36e-10,39;DOID:171,1.62e-09,10;DOID:4468,2.06e-09,2;DOID:1036,4.87e-08,8;DOID:3095,7.65e-08,22;DOID:2994,7.65e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.47e-07;5!UBERON:0002410;1.47e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.67e-07,5;UBERON:0002410,1.67e-07,5 | |||
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| ||
|short_description=p13@LMNA | |||
}} | }} |
Latest revision as of 15:02, 17 September 2015
Short description: | p13@LMNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LMNA_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000368297, ENST00000515459, uc001fnj.2, uc010pgz.1_5end |
EntrezGene: | LMNA |
HGNC: | 6636 |
UniProt: | Q5TCI8D6RB20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.67e-07 | 5 |
autonomic nervous system | 1.67e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.02e-13 | 235 |
disease of cellular proliferation | 2.92e-13 | 239 |
hematologic cancer | 3.19e-12 | 51 |
immune system cancer | 3.19e-12 | 51 |
organ system cancer | 3.48e-12 | 137 |
myeloid leukemia | 7.30e-11 | 31 |
leukemia | 4.36e-10 | 39 |
neuroectodermal tumor | 1.62e-09 | 10 |
clear cell adenocarcinoma | 2.06e-09 | 2 |
chronic leukemia | 4.87e-08 | 8 |
germ cell and embryonal cancer | 7.65e-08 | 22 |
germ cell cancer | 7.65e-08 | 22 |