FFCP PHASE1:Hg19::chr1:33160831..33160852,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:33160831..33160852,-
|short_description=p9@SYNC
|description=CAGE_peak_9_at_SYNC_5end
|association_with_transcript=20bp_to_AK024707_5end
|EntrezGene=81493...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81493 | |EntrezGene=81493 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28897 | |HGNC=28897 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H7C4 | |UniProt=Q9H7C4 | ||
|association_with_transcript=20bp_to_AK024707_5end | |||
|cluster_id=chr1:33160831..33160852,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_9_at_SYNC_5end | |||
|id=chr1:33160831..33160852,- | |||
|ontology_enrichment_celltype=CL:0002274!2.15e-09!5;CL:0000457!2.15e-09!5;CL:0002191!2.15e-09!5;CL:0000097!2.15e-09!5;CL:0000831!2.15e-09!5;CL:0002028!2.15e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.87e-19;12!CL:0000515;1.67e-09;3!CL:0000056;1.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.87e-19,12;CL:0000515,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.79e-21;11!UBERON:0009497;5.11e-18;13!UBERON:0001041;3.38e-08;30!UBERON:0003104;8.42e-08;31!CL:0000515;1.92e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.73e-12;31!DOID:1240;1.15e-09;39!DOID:7;9.04e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.49e-13,31;DOID:1240,1.43e-10,39;DOID:2531,3.53e-08,51;DOID:0060083,3.53e-08,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.45e-12;19!UBERON:0006925;1.45e-12;19!UBERON:0002423;1.04e-09;25!UBERON:0002365;2.10e-07;31!UBERON:0002330;2.10e-07;31!UBERON:0002368;5.25e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.45e-12,19;UBERON:0006925,1.45e-12,19;UBERON:0008836,1.45e-12,19;UBERON:0008835,6.05e-11,22;UBERON:0003894,6.05e-11,22;UBERON:0009854,1.69e-10,23;UBERON:0007499,1.04e-09,25;UBERON:0009497,1.04e-09,25;UBERON:0000015,1.04e-09,25;UBERON:0002423,1.04e-09,25;UBERON:0006235,1.04e-09,25;UBERON:0004161,1.04e-09,25;UBERON:0009856,2.31e-09,26;UBERON:0002365,5.94e-08,31;UBERON:0002330,5.94e-08,31;UBERON:0002368,4.12e-07,35 | |||
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| ||
|short_description=p9@SYNC | |||
}} | }} |
Latest revision as of 15:39, 17 September 2015
Short description: | p9@SYNC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SYNC_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 20bp_to_AK024707_5end |
EntrezGene: | SYNC |
HGNC: | 28897 |
UniProt: | Q9H7C4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.87e-19 | 12 |
skeletal muscle myoblast | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 1.45e-12 | 19 |
digestive gland | 1.45e-12 | 19 |
liver bud | 1.45e-12 | 19 |
hepatic diverticulum | 6.05e-11 | 22 |
liver primordium | 6.05e-11 | 22 |
digestive tract diverticulum | 1.69e-10 | 23 |
epithelial sac | 1.04e-09 | 25 |
epithelium of foregut-midgut junction | 1.04e-09 | 25 |
anatomical boundary | 1.04e-09 | 25 |
hepatobiliary system | 1.04e-09 | 25 |
foregut-midgut junction | 1.04e-09 | 25 |
septum transversum | 1.04e-09 | 25 |
sac | 2.31e-09 | 26 |
exocrine gland | 5.94e-08 | 31 |
exocrine system | 5.94e-08 | 31 |
endocrine gland | 4.12e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.49e-13 | 31 |
leukemia | 1.43e-10 | 39 |
hematologic cancer | 3.53e-08 | 51 |
immune system cancer | 3.53e-08 | 51 |