FFCP PHASE1:Hg19::chr12:16758304..16758322,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55885 | |EntrezGene=55885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |HGNC=6643 | ||
|TSSclassifier=strong | |||
|UniProt=Q58A67,Q8TAP4 | |UniProt=Q58A67,Q8TAP4 | ||
|association_with_transcript=0bp_to_ENST00000320122,NM_001243611_5end | |||
|cluster_id=chr12:16758304..16758322,- | |||
|description=CAGE_peak_27_at_LMO3_5end | |||
|id=chr12:16758304..16758322,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.04e-08;3!CL:0000737;7.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.04e-08,3;CL:0000513,1.04e-08,3;CL:0000737,7.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.90e-12;2!UBERON:0009847;8.96e-09;3!UBERON:0003353;8.96e-09;3!CL:0000513;1.04e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-39!115;UBERON:0001049!3.57e-36!57;UBERON:0005068!3.57e-36!57;UBERON:0006241!3.57e-36!57;UBERON:0007135!3.57e-36!57;UBERON:0001893!1.88e-35!34;UBERON:0002780!3.14e-34!41;UBERON:0001890!3.14e-34!41;UBERON:0006240!3.14e-34!41;UBERON:0001950!1.35e-33!20;UBERON:0003080!2.90e-33!42;UBERON:0002791!3.08e-33!33;UBERON:0002616!3.76e-32!59;UBERON:0001869!1.11e-31!32;UBERON:0002619!2.94e-30!22;UBERON:0000955!7.09e-30!69;UBERON:0006238!7.09e-30!69;UBERON:0001017!2.44e-29!82;UBERON:0005743!2.62e-29!86;UBERON:0002020!3.42e-29!34;UBERON:0003528!3.42e-29!34;UBERON:0000073!2.03e-27!94;UBERON:0001016!2.03e-27!94;UBERON:0002346!2.66e-26!90;UBERON:0000956!3.21e-26!25;UBERON:0000203!3.21e-26!25;UBERON:0003075!4.38e-26!86;UBERON:0007284!4.38e-26!86;UBERON:0003056!1.19e-22!61;UBERON:0000200!1.48e-16!6;UBERON:0001871!4.19e-16!7;UBERON:0000153!1.68e-15!129;UBERON:0007811!1.68e-15!129;UBERON:0000033!1.91e-15!123;UBERON:0000924!1.75e-12!173;UBERON:0006601!1.75e-12!173;UBERON:0004121!4.51e-12!169;UBERON:0002420!9.82e-11!9;UBERON:0007245!9.82e-11!9;UBERON:0010009!9.82e-11!9;UBERON:0010011!9.82e-11!9;UBERON:0000454!9.82e-11!9;UBERON:0000025!3.97e-09!194;UBERON:0004111!7.44e-09!241;UBERON:0002771!7.50e-09!3;UBERON:0002021!1.74e-08!5;UBERON:0000483!2.59e-08!309;UBERON:0000477!2.75e-08!286;UBERON:0000119!3.99e-08!312;UBERON:0000475!2.07e-07!365;UBERON:0000369!2.46e-07!4;UBERON:0002435!2.46e-07!4;UBERON:0000204!2.46e-07!4;UBERON:0010082!2.46e-07!4;UBERON:0001870!6.87e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;5.61e-30;3!UBERON:0005382;5.61e-30;3!UBERON:0002022;4.10e-23;1!UBERON:0001874;4.10e-23;1!UBERON:0000369;8.96e-23;4!UBERON:0002435;8.96e-23;4!UBERON:0000204;8.96e-23;4!UBERON:0009663;1.80e-13;7!UBERON:0001255;1.65e-12;2!UBERON:0001556;1.65e-12;2!UBERON:0001873;2.90e-12;2!UBERON:0002420;1.07e-10;9!UBERON:0000125;1.07e-10;9!UBERON:0007245;1.07e-10;9!UBERON:0002308;1.07e-10;9!UBERON:0010009;1.07e-10;9!UBERON:0010011;1.07e-10;9!UBERON:0000454;1.07e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,5.61e-30,3;UBERON:0005382,5.61e-30,3;UBERON:0002022,2.62e-23,1;UBERON:0001874,5.13e-23,1;UBERON:0000369,8.96e-23,4;UBERON:0002435,8.96e-23,4;UBERON:0000204,8.96e-23,4;UBERON:0010082,8.96e-23,4;UBERON:0009663,1.80e-13,7;UBERON:0001255,1.65e-12,2;UBERON:0001556,1.65e-12,2;UBERON:0001873,2.59e-12,2;UBERON:0010122,2.59e-12,2;UBERON:0002420,1.07e-10,9;UBERON:0000125,1.07e-10,9;UBERON:0007245,1.07e-10,9;UBERON:0002308,1.07e-10,9;UBERON:0010009,1.07e-10,9;UBERON:0010011,1.07e-10,9;UBERON:0000454,1.07e-10,9;UBERON:0007023,2.51e-09,114;UBERON:0000162,2.52e-07,14;UBERON:0001353,2.52e-07,14;UBERON:0000163,2.52e-07,14;UBERON:0006866,2.52e-07,14;UBERON:0000164,2.52e-07,14;UBERON:0000931,2.52e-07,14;UBERON:0004122,6.79e-07,15 | |||
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| ||
|short_description=p27@LMO3 | |||
}} | }} |
Latest revision as of 16:16, 17 September 2015
Short description: | p27@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_LMO3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320122, NM_001243611_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | Q58A67Q8TAP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.04e-08 | 3 |
cardiac muscle myoblast | 1.04e-08 | 3 |
striated muscle cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 5.61e-30 | 3 |
dorsal striatum | 5.61e-30 | 3 |
insula | 2.62e-23 | 1 |
putamen | 5.13e-23 | 1 |
corpus striatum | 8.96e-23 | 4 |
striatum | 8.96e-23 | 4 |
ventral part of telencephalon | 8.96e-23 | 4 |
future corpus striatum | 8.96e-23 | 4 |
telencephalic nucleus | 1.80e-13 | 7 |
urinary bladder | 1.65e-12 | 2 |
lower urinary tract | 1.65e-12 | 2 |
caudate nucleus | 2.59e-12 | 2 |
future caudate nucleus | 2.59e-12 | 2 |
basal ganglion | 1.07e-10 | 9 |
neural nucleus | 1.07e-10 | 9 |
nuclear complex of neuraxis | 1.07e-10 | 9 |
nucleus of brain | 1.07e-10 | 9 |
aggregate regional part of brain | 1.07e-10 | 9 |
collection of basal ganglia | 1.07e-10 | 9 |
cerebral subcortex | 1.07e-10 | 9 |
adult organism | 2.51e-09 | 114 |
cloaca | 2.52e-07 | 14 |
anal region | 2.52e-07 | 14 |
embryonic cloaca | 2.52e-07 | 14 |
terminal part of digestive tract | 2.52e-07 | 14 |
primitive urogenital sinus | 2.52e-07 | 14 |
proctodeum | 2.52e-07 | 14 |
genitourinary system | 6.79e-07 | 15 |