FFCP PHASE1:Hg19::chr13:50570019..50570028,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10206 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9976 | |||
|TSSclassifier=strong | |||
|UniProt=O60858 | |||
|association_with_transcript=0bp_to_ENST00000442421_5end | |||
|cluster_id=chr13:50570019..50570028,+ | |||
|description=CAGE_peak_10_at_TRIM13_5end | |||
|id=chr13:50570019..50570028,+ | |||
|ontology_enrichment_celltype=CL:0001014!5.96e-26!2;CL:0001016!5.96e-26!2;CL:0002057!4.51e-18!42;CL:0002009!1.33e-17!65;CL:0000860!8.09e-17!45;CL:0000557!4.86e-16!71;CL:0002194!1.36e-11!63;CL:0000576!1.36e-11!63;CL:0000040!1.36e-11!63;CL:0000559!1.36e-11!63;CL:0000453!5.57e-11!5;CL:0000839!2.27e-10!70;CL:0000763!8.79e-10!112;CL:0000049!8.79e-10!112;CL:0000766!1.69e-09!76;CL:0000840!2.66e-09!5;CL:0001029!2.66e-09!5;CL:0000738!2.97e-09!140;CL:0002031!1.01e-08!124;CL:0002087!2.58e-07!119;CL:0000037!2.83e-07!172;CL:0000566!2.83e-07!172;CL:0000988!8.51e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0001014;8.34e-18;2!CL:0001016;8.34e-18;2!CL:0000346;2.45e-12;3!CL:1000428;2.45e-12;3!CL:0000453;6.33e-08;5!CL:0002559;6.33e-08;5!CL:0000840;8.25e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,6.48e-18,2;CL:0001016,6.48e-18,2;CL:0000346,1.85e-12,3;CL:1000428,1.85e-12,3;CL:0002559,5.35e-08,5;CL:0000453,5.73e-08,5;CL:0000840,7.58e-07,5;CL:0001029,7.58e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.25e-14;10!UBERON:0005564;3.25e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.97e-14!80;UBERON:0002390!3.48e-13!102;UBERON:0003061!3.48e-13!102;UBERON:0001474!4.52e-13!86;UBERON:0002193!6.76e-12!112;UBERON:0004765!5.70e-11!101;UBERON:0001434!5.70e-11!101;UBERON:0002405!1.70e-09!115;UBERON:0000473!2.69e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.70e-17;8!UBERON:0003135;5.10e-13;11!UBERON:0000412;2.45e-12;3!UBERON:0001992;2.45e-12;3!UBERON:0002073;6.33e-08;5!UBERON:0000991;2.77e-07;21!UBERON:0003101;5.40e-07;22!UBERON:0000079;5.40e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.71e-17,8;UBERON:0003135,5.10e-13,11;UBERON:0000412,1.85e-12,3;UBERON:0001992,1.85e-12,3;UBERON:0002073,5.35e-08,5;UBERON:0005086,5.35e-08,5;UBERON:0000991,2.77e-07,21;UBERON:0009196,2.77e-07,21;UBERON:0009117,2.77e-07,21;UBERON:0005564,2.77e-07,21;UBERON:0004176,5.40e-07,22;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802177789880567,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0.689491361473237,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0,1.24564449799115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36401656792831,1.33982065078089,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@TRIM13 | |||
}} |
Latest revision as of 17:23, 17 September 2015
Short description: | p10@TRIM13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TRIM13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000442421_5end |
EntrezGene: | TRIM13 |
HGNC: | 9976 |
UniProt: | O60858 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 6.48e-18 | 2 |
immature CD1a-positive Langerhans cell | 6.48e-18 | 2 |
hair follicle dermal papilla cell | 1.85e-12 | 3 |
stem cell of epidermis | 1.85e-12 | 3 |
hair follicle cell | 5.35e-08 | 5 |
Langerhans cell | 5.73e-08 | 5 |
immature conventional dendritic cell | 7.58e-07 | 5 |
common dendritic progenitor | 7.58e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.71e-17 | 8 |
male reproductive organ | 5.10e-13 | 11 |
dermal papilla | 1.85e-12 | 3 |
papillary layer of dermis | 1.85e-12 | 3 |
hair follicle | 5.35e-08 | 5 |
hair follicle placode | 5.35e-08 | 5 |
gonad | 2.77e-07 | 21 |
indifferent external genitalia | 2.77e-07 | 21 |
indifferent gonad | 2.77e-07 | 21 |
gonad primordium | 2.77e-07 | 21 |
external genitalia | 5.40e-07 | 22 |
male organism | 5.40e-07 | 22 |
male reproductive system | 5.40e-07 | 22 |