FFCP PHASE1:Hg19::chr6:30652314..30652323,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170954 | |EntrezGene=170954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29413 | |HGNC=29413 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=139bp_to_BC023314_5end | |association_with_transcript=139bp_to_BC023314_5end | ||
|cluster_id=chr6:30652314..30652323,- | |||
|description=CAGE_peak_20_at_PPP1R18_5end | |description=CAGE_peak_20_at_PPP1R18_5end | ||
|id=chr6:30652314..30652323,- | |id=chr6:30652314..30652323,- | ||
|ontology_enrichment_celltype=CL:0000094;1.07e-31;8!CL:0000081;2.23e-29;11!CL:0000623;1.12e-16;3!CL:0000767;4.74e-16;3!CL:0000771;7.93e-12;2!CL:0000775;2.76e-08;3 | |ontology_enrichment_celltype=CL:0000988!6.39e-23!182;CL:0000037!6.70e-21!172;CL:0000566!6.70e-21!172;CL:0002032!3.27e-19!165;CL:0000837!3.27e-19!165;CL:0000738!3.48e-15!140;CL:0002087!1.22e-11!119;CL:0002031!8.40e-11!124;CL:0000542!5.06e-10!53;CL:0000051!5.06e-10!53;CL:0000763!7.24e-10!112;CL:0000049!7.24e-10!112;CL:0000838!8.29e-10!52;CL:0000034!1.33e-08!444;CL:0000048!1.51e-08!430;CL:0000723!2.84e-08!436;CL:0000081!6.09e-07!11;CL:0002320!8.81e-07!365 | ||
| | |ontology_enrichment_celltype_v019=CL:0000094;1.07e-31;8!CL:0000081;2.23e-29;11!CL:0000623;1.12e-16;3!CL:0000767;4.74e-16;3!CL:0000771;7.93e-12;2!CL:0000775;2.76e-08;3 | ||
|ontology_enrichment_disease=DOID:8692;5.78e-07;31 | |ontology_enrichment_celltype_v019_2=CL:0000094,6.89e-32,8;CL:0000081,1.64e-29,11;CL:0002032,4.14e-17,161;CL:0000837,4.14e-17,161;CL:0000623,1.04e-16,3;CL:0000825,1.04e-16,3;CL:0000988,2.03e-16,177;CL:0000767,3.41e-16,3;CL:0000037,3.73e-16,168;CL:0000771,6.61e-12,2;CL:0000738,1.56e-10,136;CL:0000763,9.08e-10,108;CL:0000049,9.08e-10,108;CL:0000775,2.76e-08,3;CL:0000838,5.08e-08,52;CL:0000542,7.78e-08,53;CL:0000051,7.78e-08,53 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;5.78e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.81e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0004535!3.14e-07!110 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0.408001382488506,0,0,0,0,0.152826811495903,0.164201178899891,0.236132343941038,2.75354993794233,3.0706351847777,1.70297735647684,0,0.30120591877825,0,0,0,0.587200878669695,0,1.20326668482085,1.30206522429511,0,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0.411167888021826,0.929119112685311,0.28769239232215,0,0,0.689491361473237,0.645484683583826,0,0,0.545812300115692,1.57306439111559,0,0,0.639337125799041,0,0.598390972864896,0.852449501065388,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0.422510572623884,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0.79566670879636,0.547992461293902,3.51992488922645,0.546138611262131,0,2.13365111283254,0.800791974072025,0,0.661044872784862,0.954053754535364,0,1.17447437874188,0.764546456250458,2.64342657158052,5.60508562981536,0.526768169550154,0,0.393010762749165,0.205601498999509,0.501559486172034,0,0.473447805734733,1.94826728407911,1.22551502573691,0.589211814949674,0.886135578334485,0,0.384273959177026,0.910415432919148,0.657751618414705,0.829050053357545,0.579606171470105,0.14828656316206,0,0,0.339928028092699,0,0,0,0.318565414324097,1.95325036156926,0,0.301150238155546,0.383959833463255,0,0.947109008176067,0,2.01606743224732,1.06976078313403,0.579297615531196,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.665188192387692,0,0,0,0,0,0.174129737299267,0.26591592103773,0.238490624305342,0,0.371457501329565,0.39752481473341,0.860234595106124,0.347140501607594,0,0,0,0.626984899610432,0.258416759169329,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,0.24406205754817,1.10298924103761,0,0.625098097988558,0.44905874525234,0.112611480483322,0,0,0.732806975721629,6.58902087180316,3.87780264148325,0,0,0.633152558322899,0.529636723252875,0,0,0.560677600142307,1.06748995729705,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.604512589365842,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.343135620597051,0,1.1240175325762,0,0,0,0,0,0,0.352226082707465,0.288732895522148,0,0.380508304469197,0,0,0,0.468008530278475,0.148631162288728,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0,0.492663237895943,0.528290604079356,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0.502257091432126,0,0.479249710983165,0,0,0.144781306667579,0,0.179060963239896,0.672510863961164,3.74358444383662,3.66566877261179,3.08023287071396,0,0,0.773288812777695,0,0,10.4860983352606,0,8.70272578215674,0.24538298343828,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0,0,0.343143423810856,0.413536052245775,0.862856803274467,0.960548020230999,0,0,0,0,0.153461973288062,0,0,0,0.482561763430822,0,0.154209693802656,0,0.0821271560138091,0,0.348631135379878,0,0.601519410909855,0,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0.193341436584244,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0.869932992075073,0.55597265731176,0.286249773483982,0,0,0.38126038784765,0.511795582622668,0,0.318203247925937,0,0,0,0,0.808729926293264,3.17020642346017,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0.0982490410131212,0.7133421029625,0.354761064070598,0,0.329294892959902,0,0,0.288666338176536,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0.79312517629427,0.213648142254946,0,0,0.185803175125719,0,0.142283686696828,0.318852545457645,2.19537308576098,1.1490322207942,3.17510374085824,0.649243880549111,1.68478306868075,0.684704037099577,0.47003968731907,2.50634477090067,0.846458889008016,0.1605880751037,0.403599414382095,0.425846237690326,0,0,0,0,0.390776190804081,0,0,0.540911356951966,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0,0.492339221844278,0,0.0898683511473268,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0.332423363800313,0,0.19606253431774,0,0,0.317873157960757,0,0.163232808159148,0,0,0,0,0,1.18608451472249,0.494255755786011,0.626531697032732,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0.189559738885464,0,0,0.664653872707185,0.99297586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| ||
|short_description=p20@PPP1R18 | |short_description=p20@PPP1R18 | ||
}} | }} |
Latest revision as of 17:34, 17 September 2015
Short description: | p20@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PPP1R18_5end |
Coexpression cluster: | NA |
Association with transcript: | 139bp_to_BC023314_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 6.89e-32 | 8 |
blood cell | 1.64e-29 | 11 |
hematopoietic oligopotent progenitor cell | 4.14e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.14e-17 | 161 |
natural killer cell | 1.04e-16 | 3 |
pro-NK cell | 1.04e-16 | 3 |
hematopoietic cell | 2.03e-16 | 177 |
basophil | 3.41e-16 | 3 |
hematopoietic stem cell | 3.73e-16 | 168 |
eosinophil | 6.61e-12 | 2 |
leukocyte | 1.56e-10 | 136 |
myeloid cell | 9.08e-10 | 108 |
common myeloid progenitor | 9.08e-10 | 108 |
neutrophil | 2.76e-08 | 3 |
lymphoid lineage restricted progenitor cell | 5.08e-08 | 52 |
lymphocyte | 7.78e-08 | 53 |
common lymphoid progenitor | 7.78e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.81e-07 | 31 |