FFCP PHASE1:Hg19::chr7:20687017..20687030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340273 | |EntrezGene=340273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=46 | |HGNC=46 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M3G0 | |UniProt=Q2M3G0 | ||
|association_with_transcript=-14bp_to_ENST00000258738_5end | |association_with_transcript=-14bp_to_ENST00000258738_5end | ||
|cluster_id=chr7:20687017..20687030,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_2_at_ABCB5_5end | |description=CAGE_peak_2_at_ABCB5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000147!5.30e-24!14;CL:0000325!3.63e-17!39;CL:0000148!1.12e-14!10;CL:0000541!1.12e-14!10;CL:0000149!3.06e-12!4;CL:0000710!1.81e-10!20;CL:0002567!3.84e-10!3;CL:0002586!2.23e-09!3;CL:0000075!7.74e-09!27 | |ontology_enrichment_celltype=CL:0000147!5.30e-24!14;CL:0000325!3.63e-17!39;CL:0000148!1.12e-14!10;CL:0000541!1.12e-14!10;CL:0000149!3.06e-12!4;CL:0000710!1.81e-10!20;CL:0002567!3.84e-10!3;CL:0002586!2.23e-09!3;CL:0000075!7.74e-09!27 | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.10e-52;10!CL:0000147;6.42e-37;14!CL:0002567;1.27e-32;3!CL:0000710;1.11e-25;20!CL:0000075;7.19e-19;27!CL:0002077;3.33e-13;34!CL:0002566;4.53e-12;1 | |ontology_enrichment_celltype_v019=CL:0000148;7.10e-52;10!CL:0000147;6.42e-37;14!CL:0002567;1.27e-32;3!CL:0000710;1.11e-25;20!CL:0000075;7.19e-19;27!CL:0002077;3.33e-13;34!CL:0002566;4.53e-12;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.10e-52,10;CL:0000541,7.10e-52,10;CL:0000147,6.42e-37,14;CL:0002567,1.27e-32,3;CL:0000710,1.11e-25,20;CL:0000075,7.19e-19,27;CL:0002077,7.46e-15,34;CL:0002566,4.53e-12,1;CL:0000333,1.32e-11,41;CL:0000133,5.68e-08,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1909!3.11e-07!2 | |ontology_enrichment_disease=DOID:1909!3.11e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;4.61e-22;2 | |ontology_enrichment_disease_v019=DOID:1909;4.61e-22;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,4.37e-22,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.06e-11!115;UBERON:0007625!6.34e-11!11;UBERON:0000020!8.89e-10!23;UBERON:0000966!1.01e-09!5;UBERON:0005388!1.01e-09!5;UBERON:0001802!1.01e-09!5;UBERON:0000970!2.14e-09!20;UBERON:0001781!2.23e-09!3;UBERON:0001782!2.23e-09!3;UBERON:0005424!2.23e-09!3;UBERON:0001032!2.76e-09!24;UBERON:0004456!2.76e-09!24;UBERON:0002104!7.23e-09!21;UBERON:0000019!7.92e-08!19;UBERON:0000047!7.92e-08!19;UBERON:0004088!7.92e-08!19;UBERON:0003072!7.92e-08!19;UBERON:0003071!7.92e-08!19;UBERON:0004128!7.92e-08!19;UBERON:0001456!5.91e-07!21 | |ontology_enrichment_uberon=UBERON:0007023!2.06e-11!115;UBERON:0007625!6.34e-11!11;UBERON:0000020!8.89e-10!23;UBERON:0000966!1.01e-09!5;UBERON:0005388!1.01e-09!5;UBERON:0001802!1.01e-09!5;UBERON:0000970!2.14e-09!20;UBERON:0001781!2.23e-09!3;UBERON:0001782!2.23e-09!3;UBERON:0005424!2.23e-09!3;UBERON:0001032!2.76e-09!24;UBERON:0004456!2.76e-09!24;UBERON:0002104!7.23e-09!21;UBERON:0000019!7.92e-08!19;UBERON:0000047!7.92e-08!19;UBERON:0004088!7.92e-08!19;UBERON:0003072!7.92e-08!19;UBERON:0003071!7.92e-08!19;UBERON:0004128!7.92e-08!19;UBERON:0001456!5.91e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.62e-14;3!UBERON:0004054;1.62e-14;3!UBERON:0001000;1.63e-11;1!UBERON:0001301;1.63e-11;1!UBERON:0005352;1.63e-11;1!UBERON:0005904;3.98e-11;4!UBERON:0003135;6.08e-09;11!UBERON:0003101;1.11e-07;22!UBERON:0000079;1.11e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0006947;1.62e-14;3!UBERON:0004054;1.62e-14;3!UBERON:0001000;1.63e-11;1!UBERON:0001301;1.63e-11;1!UBERON:0005352;1.63e-11;1!UBERON:0005904;3.98e-11;4!UBERON:0003135;6.08e-09;11!UBERON:0003101;1.11e-07;22!UBERON:0000079;1.11e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.62e-14,3;UBERON:0004054,1.62e-14,3;UBERON:0001000,1.47e-11,1;UBERON:0005352,1.47e-11,1;UBERON:0001301,1.81e-11,1;UBERON:0005904,3.99e-11,4;UBERON:0003135,5.83e-09,11;UBERON:0003101,1.11e-07,22;UBERON:0000079,1.11e-07,22 | |||
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| ||
|short_description=p2@ABCB5 | |short_description=p2@ABCB5 | ||
}} | }} |
Latest revision as of 17:42, 17 September 2015
Short description: | p2@ABCB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCB5_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -14bp_to_ENST00000258738_5end |
EntrezGene: | ABCB5 |
HGNC: | 46 |
UniProt: | Q2M3G0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.10e-52 | 10 |
melanoblast | 7.10e-52 | 10 |
pigment cell | 6.42e-37 | 14 |
light melanocyte | 1.27e-32 | 3 |
neurecto-epithelial cell | 1.11e-25 | 20 |
columnar/cuboidal epithelial cell | 7.19e-19 | 27 |
ecto-epithelial cell | 7.46e-15 | 34 |
dark melanocyte | 4.53e-12 | 1 |
migratory neural crest cell | 1.32e-11 | 41 |
neurectodermal cell | 5.68e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.62e-14 | 3 |
internal male genitalia | 1.62e-14 | 3 |
vas deferens | 1.47e-11 | 1 |
spermatic cord | 1.47e-11 | 1 |
epididymis | 1.81e-11 | 1 |
duct of male reproductive system | 3.99e-11 | 4 |
male reproductive organ | 5.83e-09 | 11 |
male organism | 1.11e-07 | 22 |
male reproductive system | 1.11e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.37e-22 | 2 |