FFCP PHASE1:Hg19::chr6:30685041..30685111,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9656 | |EntrezGene=9656 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21163 | |HGNC=21163 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1C2 | |UniProt=F8W1C2 | ||
|association_with_transcript=-40bp_to_ENST00000422104,uc003nri.2,uc011dmp.1_5end | |association_with_transcript=-40bp_to_ENST00000422104,uc003nri.2,uc011dmp.1_5end | ||
|cluster_id=chr6:30685041..30685111,- | |||
|description=CAGE_peak_1_at_MDC1_5end | |description=CAGE_peak_1_at_MDC1_5end | ||
|id=chr6:30685041..30685111,- | |id=chr6:30685041..30685111,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!3.15e-10!51;DOID:0060083!3.15e-10!51;DOID:1240!4.50e-09!39;DOID:8692!4.86e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.40e-08;39!DOID:8692;7.70e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.15e-10,51;DOID:0060083,3.15e-10,51;DOID:1240,4.50e-09,39;DOID:8692,4.86e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002346!4.53e-08!90;UBERON:0003075!2.14e-07!86;UBERON:0007284!2.14e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.36e-08,86;UBERON:0003075,2.09e-07,82;UBERON:0007284,2.09e-07,82 | |||
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| ||
|short_description=p1@MDC1 | |short_description=p1@MDC1 | ||
}} | }} |
Latest revision as of 17:55, 17 September 2015
Short description: | p1@MDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000422104, uc003nri.2, uc011dmp.1_5end |
EntrezGene: | MDC1 |
HGNC: | 21163 |
UniProt: | F8W1C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.36e-08 | 86 |
neural plate | 2.09e-07 | 82 |
presumptive neural plate | 2.09e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.15e-10 | 51 |
immune system cancer | 3.15e-10 | 51 |
leukemia | 4.50e-09 | 39 |
myeloid leukemia | 4.86e-07 | 31 |