FFCP PHASE1:Hg19::chr4:40194570..40194608,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399 | |EntrezGene=399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |HGNC=686 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA52 | |UniProt=D6RA52 | ||
|association_with_transcript=0bp_to_ENST00000503754,ENST00000507851_5end | |association_with_transcript=0bp_to_ENST00000503754,ENST00000507851_5end | ||
|cluster_id=chr4:40194570..40194608,+ | |||
|coexpression_cluster_id=C1183 | |||
|description=CAGE_peak_5_at_RHOH_5end | |description=CAGE_peak_5_at_RHOH_5end | ||
|id=chr4:40194570..40194608,+ | |id=chr4:40194570..40194608,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.63e-48!24;CL:0000826!2.63e-48!24;CL:0000542!1.04e-37!53;CL:0000051!1.04e-37!53;CL:0000838!9.76e-36!52;CL:0000236!1.37e-29!14;CL:0002087!4.12e-18!119;CL:0000738!5.35e-15!140;CL:0002031!1.07e-12!124;CL:0000037!2.15e-10!172;CL:0000566!2.15e-10!172;CL:0000988!2.61e-09!182;CL:0002032!5.23e-09!165;CL:0000837!5.23e-09!165;CL:0000817!3.55e-08!3;CL:0000842!4.40e-07!3 | |ontology_enrichment_celltype=CL:0000945!2.63e-48!24;CL:0000826!2.63e-48!24;CL:0000542!1.04e-37!53;CL:0000051!1.04e-37!53;CL:0000838!9.76e-36!52;CL:0000236!1.37e-29!14;CL:0002087!4.12e-18!119;CL:0000738!5.35e-15!140;CL:0002031!1.07e-12!124;CL:0000037!2.15e-10!172;CL:0000566!2.15e-10!172;CL:0000988!2.61e-09!182;CL:0002032!5.23e-09!165;CL:0000837!5.23e-09!165;CL:0000817!3.55e-08!3;CL:0000842!4.40e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.05e-90;24!CL:0000236;1.91e-51;13!CL:0000542;5.41e-27;53!CL:0000785;8.02e-07;1!CL:0000819;8.02e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.80e-90,24;CL:0000826,2.80e-90,24;CL:0000236,3.04e-56,14;CL:0000542,8.66e-43,53;CL:0000051,8.66e-43,53;CL:0000838,2.45e-39,52;CL:0002087,4.57e-17,115;CL:0000738,2.55e-15,136;CL:0002031,2.03e-14,120;CL:0002032,3.16e-12,161;CL:0000837,3.16e-12,161;CL:0000785,8.11e-12,2;CL:0000955,8.11e-12,2;CL:0000818,8.11e-12,2;CL:0000954,8.11e-12,2;CL:0000816,8.11e-12,2;CL:0000037,1.59e-11,168;CL:0000988,1.05e-10,177;CL:0000817,3.63e-08,3;CL:0000819,8.98e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;5.41e-27;53!UBERON:0004872;4.32e-13;7!CL:0000954;8.34e-12;2!UBERON:0001045;6.20e-07;1 | |||
|ontology_enrichment_disease=DOID:0060058!8.41e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.62e-14;10!DOID:12603;2.99e-07;1!DOID:630;3.78e-07;1!DOID:0050177;3.78e-07;1!DOID:0050427;3.78e-07;1!DOID:0060073;8.02e-07;1!DOID:8675;8.02e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.83e-14,10;DOID:12603,2.99e-07,1;DOID:630,3.78e-07,1;DOID:0050177,3.78e-07,1;DOID:0050427,3.78e-07,1;DOID:0060073,8.98e-07,1;DOID:8675,8.98e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.79e-09!115;UBERON:0004177!5.99e-09!7;UBERON:0000178!6.78e-09!15;UBERON:0000179!6.78e-09!15;UBERON:0000463!6.78e-09!15;UBERON:0002106!9.78e-09!3;UBERON:0004854!9.78e-09!3;UBERON:0009034!9.78e-09!3;UBERON:0002095!9.78e-09!3;UBERON:0004782!9.78e-09!3;UBERON:0003281!9.78e-09!3;UBERON:0009664!9.78e-09!3;UBERON:0002296!9.78e-09!3;UBERON:0005602!9.78e-09!3;UBERON:0001179!9.78e-09!3;UBERON:0006293!9.78e-09!3 | |ontology_enrichment_uberon=UBERON:0007023!2.79e-09!115;UBERON:0004177!5.99e-09!7;UBERON:0000178!6.78e-09!15;UBERON:0000179!6.78e-09!15;UBERON:0000463!6.78e-09!15;UBERON:0002106!9.78e-09!3;UBERON:0004854!9.78e-09!3;UBERON:0009034!9.78e-09!3;UBERON:0002095!9.78e-09!3;UBERON:0004782!9.78e-09!3;UBERON:0003281!9.78e-09!3;UBERON:0009664!9.78e-09!3;UBERON:0002296!9.78e-09!3;UBERON:0005602!9.78e-09!3;UBERON:0001179!9.78e-09!3;UBERON:0006293!9.78e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.36e-17;3!UBERON:0001829;1.26e-11;2!UBERON:0004177;9.16e-11;5!UBERON:0005057;9.16e-11;5!UBERON:0002390;4.13e-07;32!UBERON:0002372;5.52e-07;1!UBERON:0001961;5.52e-07;1!UBERON:0001744;5.52e-07;1!UBERON:0001042;5.52e-07;1!UBERON:0001735;5.52e-07;1!UBERON:0001154;6.20e-07;1!UBERON:0001153;6.20e-07;1!UBERON:0009854;6.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.15e-17,3;UBERON:0004854,1.15e-17,3;UBERON:0009034,1.15e-17,3;UBERON:0002095,1.15e-17,3;UBERON:0004782,1.15e-17,3;UBERON:0003281,1.15e-17,3;UBERON:0009664,1.15e-17,3;UBERON:0002296,1.15e-17,3;UBERON:0005602,1.15e-17,3;UBERON:0001179,1.15e-17,3;UBERON:0006293,1.15e-17,3;UBERON:0001829,1.66e-11,2;UBERON:0004177,7.56e-08,7;UBERON:0005057,7.56e-08,7;UBERON:0002372,5.37e-07,1;UBERON:0001961,5.37e-07,1;UBERON:0001744,5.37e-07,1;UBERON:0001735,5.37e-07,1;UBERON:0001154,6.02e-07,1;UBERON:0001153,6.02e-07,1;UBERON:0001045,6.02e-07,1;UBERON:0000945,6.43e-07,8;UBERON:0010039,6.43e-07,8 | |||
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| ||
|short_description=p5@RHOH | |short_description=p5@RHOH | ||
}} | }} |
Latest revision as of 18:02, 17 September 2015
Short description: | p5@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RHOH_5end |
Coexpression cluster: | C1183_splenic_CD19_Burkitt_acute_xeroderma_B_appendix |
Association with transcript: | 0bp_to_ENST00000503754, ENST00000507851_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | D6RA52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.80e-90 | 24 |
pro-B cell | 2.80e-90 | 24 |
B cell | 3.04e-56 | 14 |
lymphocyte | 8.66e-43 | 53 |
common lymphoid progenitor | 8.66e-43 | 53 |
lymphoid lineage restricted progenitor cell | 2.45e-39 | 52 |
nongranular leukocyte | 4.57e-17 | 115 |
leukocyte | 2.55e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 2.03e-14 | 120 |
hematopoietic oligopotent progenitor cell | 3.16e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.16e-12 | 161 |
mature B cell | 8.11e-12 | 2 |
pre-B-II cell | 8.11e-12 | 2 |
transitional stage B cell | 8.11e-12 | 2 |
small pre-B-II cell | 8.11e-12 | 2 |
immature B cell | 8.11e-12 | 2 |
hematopoietic stem cell | 1.59e-11 | 168 |
hematopoietic cell | 1.05e-10 | 177 |
precursor B cell | 3.63e-08 | 3 |
B-1 B cell | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.15e-17 | 3 |
gastrointestinal system mesentery | 1.15e-17 | 3 |
stomach region | 1.15e-17 | 3 |
mesentery | 1.15e-17 | 3 |
gastrointestinal system serosa | 1.15e-17 | 3 |
mesentery of stomach | 1.15e-17 | 3 |
gut mesentery | 1.15e-17 | 3 |
dorsal mesentery | 1.15e-17 | 3 |
dorsal mesogastrium | 1.15e-17 | 3 |
peritoneal cavity | 1.15e-17 | 3 |
spleen primordium | 1.15e-17 | 3 |
major salivary gland | 1.66e-11 | 2 |
hemopoietic organ | 7.56e-08 | 7 |
immune organ | 7.56e-08 | 7 |
tonsil | 5.37e-07 | 1 |
mucosa-associated lymphoid tissue | 5.37e-07 | 1 |
lymphoid tissue | 5.37e-07 | 1 |
tonsillar ring | 5.37e-07 | 1 |
vermiform appendix | 6.02e-07 | 1 |
caecum | 6.02e-07 | 1 |
midgut | 6.02e-07 | 1 |
stomach | 6.43e-07 | 8 |
food storage organ | 6.43e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.83e-14 | 10 |
acute leukemia | 2.99e-07 | 1 |
genetic disease | 3.78e-07 | 1 |
monogenic disease | 3.78e-07 | 1 |
xeroderma pigmentosum | 3.78e-07 | 1 |
lymphatic system cancer | 8.98e-07 | 1 |
lymphosarcoma | 8.98e-07 | 1 |