FFCP PHASE1:Hg19::chr2:56411726..56411742,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:56411726..56411742,+ to FFCP PHASE1:Hg19::chr2:56411726..56411742,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114800 | |EntrezGene=114800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29400 | |HGNC=29400 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PX6 | |UniProt=Q96PX6 | ||
|association_with_transcript=468bp_to_ENST00000407595,NM_001080433,uc002rzn.2_5end | |||
|cluster_id=chr2:56411726..56411742,+ | |||
|description=CAGE_peak_3_at_CCDC85A_5end | |||
|id=chr2:56411726..56411742,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.73e-08!24;CL:0000071!3.55e-08!18;CL:0002546!3.55e-08!18;CL:0002620!4.71e-07!23;CL:0000222!4.74e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.41e-14;24!CL:0000071;6.93e-11;18!CL:0000515;7.75e-09;3!CL:0000197;2.05e-08;6!CL:0000098;2.05e-08;6!CL:0002167;2.05e-08;6!CL:1000413;1.24e-07;9!CL:0000115;1.28e-07;36!CL:0002543;1.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.14e-14,24;CL:0000071,4.46e-11,18;CL:0002546,4.46e-11,18;CL:0000115,1.07e-08,36;CL:0000197,1.83e-08,6;CL:0000098,1.83e-08,6;CL:0002167,1.83e-08,6;CL:1000413,9.25e-08,9;CL:0002543,1.34e-07,6;CL:0000213,2.03e-07,58;CL:0000215,2.03e-07,58;CL:0000515,9.72e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;6.93e-11;18!UBERON:0005062;1.87e-07;4!UBERON:0007284;1.87e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.08e-19!115;UBERON:0001981!3.35e-13!60;UBERON:0007500!3.35e-13!60;UBERON:0004537!3.35e-13!60;UBERON:0006965!3.35e-13!60;UBERON:0004872!4.49e-13!84;UBERON:0000025!5.81e-13!194;UBERON:0000055!1.28e-12!69;UBERON:0004111!7.20e-11!241;UBERON:0002049!7.71e-11!79;UBERON:0007798!7.71e-11!79;UBERON:0000477!7.94e-11!286;UBERON:0001009!4.79e-10!113;UBERON:0000483!3.83e-09!309;UBERON:0004535!6.85e-09!110;UBERON:0000119!9.13e-09!312;UBERON:0003075!1.34e-08!86;UBERON:0007284!1.34e-08!86;UBERON:0001637!3.37e-08!42;UBERON:0003509!3.37e-08!42;UBERON:0004572!3.37e-08!42;UBERON:0001986!3.55e-08!18;UBERON:0004638!3.55e-08!18;UBERON:0004852!3.55e-08!18;UBERON:0000468!1.02e-07!659;UBERON:0002346!1.19e-07!90;UBERON:0000475!1.61e-07!365;UBERON:0001049!3.86e-07!57;UBERON:0005068!3.86e-07!57;UBERON:0006241!3.86e-07!57;UBERON:0007135!3.86e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.93e-11;18!UBERON:0001986;6.93e-11;18!UBERON:0004852;6.93e-11;18!UBERON:0003978;7.85e-10;3!UBERON:0000946;7.85e-10;3!UBERON:0004151;2.19e-09;3!UBERON:0000487;1.35e-08;22!UBERON:0003915;1.24e-07;9!UBERON:0004700;1.24e-07;9!UBERON:0001917;1.24e-07;9!UBERON:0002133;1.88e-07;2!UBERON:0001638;2.08e-07;9!UBERON:0003920;2.08e-07;9!UBERON:0004582;2.08e-07;9!UBERON:0006914;2.29e-07;25!UBERON:0002081;5.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.93e-14,68;UBERON:0007500,2.75e-12,59;UBERON:0001981,2.75e-12,59;UBERON:0004537,2.75e-12,59;UBERON:0006965,2.75e-12,59;UBERON:0001009,4.21e-12,112;UBERON:0002049,1.03e-11,78;UBERON:0007798,1.03e-11,78;UBERON:0004638,4.46e-11,18;UBERON:0001986,4.46e-11,18;UBERON:0004852,4.46e-11,18;UBERON:0004872,1.57e-10,83;UBERON:0004535,1.60e-10,109;UBERON:0004797,5.93e-10,7;UBERON:0003978,7.11e-10,3;UBERON:0009751,7.11e-10,3;UBERON:0000946,7.11e-10,3;UBERON:0002523,7.11e-10,3;UBERON:0005983,7.11e-10,3;UBERON:0002165,7.11e-10,3;UBERON:0002062,7.11e-10,3;UBERON:0007280,7.11e-10,3;UBERON:0004151,2.26e-09,3;UBERON:0000487,9.49e-09,22;UBERON:0003915,9.25e-08,9;UBERON:0004700,9.25e-08,9;UBERON:0001917,9.25e-08,9;UBERON:0002133,1.56e-07,2;UBERON:0006914,1.69e-07,25;UBERON:0001638,2.45e-07,9;UBERON:0003920,2.45e-07,9;UBERON:0004582,2.45e-07,9;UBERON:0002081,4.89e-07,2;UBERON:0010227,4.89e-07,2 | |||
|phase1_expression=0.908391896352783,1.2846031433459,0.563817616383885,2.00146596706261,0,1.74467704820074,0,0,0,0,0,0,0,0.247532705920093,0.994192127183747,0,0.602694528023977,1.46062018077475,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,0.434539556882471,0,0,0.0945348171640679,0,0.087834785693126,0.589405839739707,0,0,0,0.522389211897802,0.664789802594326,0,0,0,1.78886166630035,0,1.04142150482278,1.69592382577203,2.51699661725944,1.37559020970034,0.835979866147242,2.06733407335463,2.84613010149368,1.00416183829401,0,0,0.732186172644509,0.367663080345869,0.81014194788176,1.7859945656816,0.673588117878509,1.35133776579987,1.53316637465883,0,1.09921046358244,0,0,0,0,1.01304409331664,0,0.860509862246441,1.06400514659507,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0.113432183160021,1.4351170855109,0.85422955527427,0.211931901159562,1.50045548042201,0.721367704669072,0.515281080091258,0.37223371266318,1.5189869901714,0.974370051611986,0.757301322732344,0.644349290496095,0.323292113637624,1.42003837006646,0.906768884048762,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,1.68053230485111,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,1.44781306667579,1.64381058040307,1.07436577943937,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.36807447515742,0,0.271265023699736,1.45579603071565,2.3195768543631,3.31175071571263,2.6942525448324,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,2.76231551918512,0.561320188866147,0.896974044789907,2.04682899626681,0.482561763430822,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.510281115829547,0.431831832204279,0,0,0,0,0,0,0,0,0,1.31205858279882,0.650756789328606,0.618246069886334,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0,0.235624804691373,0.404364963146632,0,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,1.82619339266434,0.6196469961995,0.845086807596724,0.430234056612155,0.687743287091848,2.85336841185,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0.796991953004279,0.828851746593443,0,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0.927680981618513,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,1.73624994933292,0,0,0,0.442317039724898,0.591095237907095,0.658156191461918,0,2.23077990845765,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,1.48260564340311,0,0,0.471807930864739,0,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.873633341210151,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.633107959558787,0,0,0.85381197895741,0.599428828746391,0,0,2.05913997434357,0,0,0,0.815425236441684,0.627617077873999,0,0,0,0.136905378891993,0,0.429765441419957,0,2.79282401272254,1.3749625440701,3.58936512288407,1.39775300349294,0.429226048136571,1.11585728720936,1.2764859772478,0.360299883542404,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.485996453264197,0,0.394028536495991,0.367182116944987,0,0,1.53532157855556,1.42939065274673,1.32418394073086,0,0.542999601753713,0,0.653174720218818,1.19730191562487,0,0.851940108927109,0,0.146552233678082,0,0.517131825446202,0.79339561045614,0.171086837884329,0,0.640724475406168,2.51526888159466,0.828478110694391,0,0,0,0,0.544017803369474,2.506898940227,0,0.983617892129413,0,0,0.488105059607853,0.625954653532499,0.573409195690071,0.443716206147409,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.63718706865481,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0.537052785212442,0,0,0,0,0,0,0.963099152036517,0.428883182749851,0.260994291965212,1.58694147858591,0.463044948647668,0.244736704506468,1.96997725189636,0.308801447160972,1.31570429747224,0,0.38582807654183,0.844712203265363,0,0,0.303859956177382,0.691292180758654,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,0.127894371303652,1.40172254815686,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.205116364240755,0.756215088665154,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0.49131575253029,0,0.742913430802341,0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| ||
|short_description=p3@CCDC85A | |||
}} | }} |
Latest revision as of 18:29, 17 September 2015
Short description: | p3@CCDC85A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC85A_5end |
Coexpression cluster: | NA |
Association with transcript: | 468bp_to_ENST00000407595, NM_001080433, uc002rzn.2_5end |
EntrezGene: | CCDC85A |
HGNC: | 29400 |
UniProt: | Q96PX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.14e-14 | 24 |
blood vessel endothelial cell | 4.46e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.46e-11 | 18 |
endothelial cell | 1.07e-08 | 36 |
receptor cell | 1.83e-08 | 6 |
sensory epithelial cell | 1.83e-08 | 6 |
olfactory epithelial cell | 1.83e-08 | 6 |
endothelial cell of artery | 9.25e-08 | 9 |
vein endothelial cell | 1.34e-07 | 6 |
lining cell | 2.03e-07 | 58 |
barrier cell | 2.03e-07 | 58 |
skeletal muscle myoblast | 9.72e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.93e-14 | 68 |
epithelial tube open at both ends | 2.75e-12 | 59 |
blood vessel | 2.75e-12 | 59 |
blood vasculature | 2.75e-12 | 59 |
vascular cord | 2.75e-12 | 59 |
circulatory system | 4.21e-12 | 112 |
vasculature | 1.03e-11 | 78 |
vascular system | 1.03e-11 | 78 |
blood vessel endothelium | 4.46e-11 | 18 |
endothelium | 4.46e-11 | 18 |
cardiovascular system endothelium | 4.46e-11 | 18 |
splanchnic layer of lateral plate mesoderm | 1.57e-10 | 83 |
cardiovascular system | 1.60e-10 | 109 |
blood vessel layer | 5.93e-10 | 7 |
valve | 7.11e-10 | 3 |
cardiac mesenchyme | 7.11e-10 | 3 |
cardial valve | 7.11e-10 | 3 |
tunica intima | 7.11e-10 | 3 |
heart layer | 7.11e-10 | 3 |
endocardium | 7.11e-10 | 3 |
endocardial cushion | 7.11e-10 | 3 |
presumptive endocardium | 7.11e-10 | 3 |
cardiac chamber | 2.26e-09 | 3 |
simple squamous epithelium | 9.49e-09 | 22 |
endothelial tube | 9.25e-08 | 9 |
arterial system endothelium | 9.25e-08 | 9 |
endothelium of artery | 9.25e-08 | 9 |
atrioventricular valve | 1.56e-07 | 2 |
squamous epithelium | 1.69e-07 | 25 |
vein | 2.45e-07 | 9 |
venous blood vessel | 2.45e-07 | 9 |
venous system | 2.45e-07 | 9 |
cardiac atrium | 4.89e-07 | 2 |
future cardiac atrium | 4.89e-07 | 2 |