FFCP PHASE1:Hg19::chr2:16082384..16082391,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4613 | |EntrezGene=4613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=7559 | |HGNC=7559 | ||
|TSSclassifier=strong | |||
|UniProt=Q53XS5 | |UniProt=Q53XS5 | ||
|association_with_transcript=197bp_to_AB464743,BT007384_5end | |association_with_transcript=197bp_to_AB464743,BT007384_5end | ||
|cluster_id=chr2:16082384..16082391,+ | |||
|coexpression_cluster_id=C135 | |coexpression_cluster_id=C135 | ||
|description=CAGE_peak_9_at_MYCN_5end | |description=CAGE_peak_9_at_MYCN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;7.76e-118;5!CL:0002321;2.90e-40;15 | |ontology_enrichment_celltype_v019=CL:0000333;7.76e-118;5!CL:0002321;2.90e-40;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000221;6.70e-10;72!CL:0000133;1.64e-07;59 | |ontology_enrichment_development_v019=CL:0000221;6.70e-10;72!CL:0000133;1.64e-07;59 | ||
|ontology_enrichment_disease=DOID:171!7.25e-20!10;DOID:169!9.10e-13!6;DOID:3095!1.32e-12!22;DOID:2994!1.32e-12!22 | |ontology_enrichment_disease=DOID:171!7.25e-20!10;DOID:169!9.10e-13!6;DOID:3095!1.32e-12!22;DOID:2994!1.32e-12!22 | ||
|ontology_enrichment_disease_v019=DOID:169;1.83e-98;6!DOID:171;1.10e-59;10!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22 | |ontology_enrichment_disease_v019=DOID:169;1.83e-98;6!DOID:171;1.10e-59;10!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22 | ||
|ontology_enrichment_disease_v019_2=DOID:169,1.83e-98,6;DOID:171,1.10e-59,10;DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!3.25e-15!5;UBERON:0002410!3.25e-15!5;UBERON:0000073!4.21e-13!94;UBERON:0001016!4.21e-13!94;UBERON:0002346!6.67e-12!90;UBERON:0000988!3.60e-11!3;UBERON:0000924!5.76e-11!173;UBERON:0006601!5.76e-11!173;UBERON:0000956!4.67e-10!25;UBERON:0000203!4.67e-10!25;UBERON:0002020!7.32e-10!34;UBERON:0003528!7.32e-10!34;UBERON:0001049!2.54e-09!57;UBERON:0005068!2.54e-09!57;UBERON:0006241!2.54e-09!57;UBERON:0007135!2.54e-09!57;UBERON:0000955!3.42e-09!69;UBERON:0006238!3.42e-09!69;UBERON:0001017!3.49e-09!82;UBERON:0002616!5.75e-09!59;UBERON:0001950!6.53e-09!20;UBERON:0002902!8.49e-09!1;UBERON:0009899!8.49e-09!1;UBERON:0003075!8.92e-09!86;UBERON:0007284!8.92e-09!86;UBERON:0002022!1.07e-08!1;UBERON:0005743!1.11e-08!86;UBERON:0000010!1.14e-08!8;UBERON:0003056!1.15e-08!61;UBERON:0004121!1.45e-08!169;UBERON:0002780!3.78e-08!41;UBERON:0001890!3.78e-08!41;UBERON:0006240!3.78e-08!41;UBERON:0002619!4.04e-08!22;UBERON:0003080!6.10e-08!42;UBERON:0001869!8.06e-08!32;UBERON:0002791!1.42e-07!33;UBERON:0000153!1.57e-07!129;UBERON:0007811!1.57e-07!129;UBERON:0001893!2.41e-07!34;UBERON:0002021!4.85e-07!5;UBERON:0000033!9.81e-07!123 | |ontology_enrichment_uberon=UBERON:0000013!3.25e-15!5;UBERON:0002410!3.25e-15!5;UBERON:0000073!4.21e-13!94;UBERON:0001016!4.21e-13!94;UBERON:0002346!6.67e-12!90;UBERON:0000988!3.60e-11!3;UBERON:0000924!5.76e-11!173;UBERON:0006601!5.76e-11!173;UBERON:0000956!4.67e-10!25;UBERON:0000203!4.67e-10!25;UBERON:0002020!7.32e-10!34;UBERON:0003528!7.32e-10!34;UBERON:0001049!2.54e-09!57;UBERON:0005068!2.54e-09!57;UBERON:0006241!2.54e-09!57;UBERON:0007135!2.54e-09!57;UBERON:0000955!3.42e-09!69;UBERON:0006238!3.42e-09!69;UBERON:0001017!3.49e-09!82;UBERON:0002616!5.75e-09!59;UBERON:0001950!6.53e-09!20;UBERON:0002902!8.49e-09!1;UBERON:0009899!8.49e-09!1;UBERON:0003075!8.92e-09!86;UBERON:0007284!8.92e-09!86;UBERON:0002022!1.07e-08!1;UBERON:0005743!1.11e-08!86;UBERON:0000010!1.14e-08!8;UBERON:0003056!1.15e-08!61;UBERON:0004121!1.45e-08!169;UBERON:0002780!3.78e-08!41;UBERON:0001890!3.78e-08!41;UBERON:0006240!3.78e-08!41;UBERON:0002619!4.04e-08!22;UBERON:0003080!6.10e-08!42;UBERON:0001869!8.06e-08!32;UBERON:0002791!1.42e-07!33;UBERON:0000153!1.57e-07!129;UBERON:0007811!1.57e-07!129;UBERON:0001893!2.41e-07!34;UBERON:0002021!4.85e-07!5;UBERON:0000033!9.81e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.76e-118;5!UBERON:0002410;7.76e-118;5!UBERON:0000010;3.75e-66;8 | |ontology_enrichment_uberon_v019=UBERON:0000013;7.76e-118;5!UBERON:0002410;7.76e-118;5!UBERON:0000010;3.75e-66;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.76e-118,5;UBERON:0002410,7.76e-118,5;UBERON:0000010,3.75e-66,8;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8710215608104,2.69562028491704,0,9.61044816089722,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50141507858475,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8710215608104,2.69562028491704,0,9.61044816089722,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50141507858475,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@MYCN | |short_description=p9@MYCN | ||
}} | }} |
Latest revision as of 19:24, 17 September 2015
Short description: | p9@MYCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MYCN_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 197bp_to_AB464743, BT007384_5end |
EntrezGene: | MYCN |
HGNC: | 7559 |
UniProt: | Q53XS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.76e-118 | 5 |
autonomic nervous system | 7.76e-118 | 5 |
peripheral nervous system | 3.75e-66 | 8 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.83e-98 | 6 |
neuroectodermal tumor | 1.10e-59 | 10 |
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |