FFCP PHASE1:Hg19::chr10:28035112..28035130,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283078 | |EntrezGene=283078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23729 | |HGNC=23729 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYA7 | |UniProt=Q8IYA7 | ||
|association_with_transcript=-123bp_to_ENST00000375790_5end | |association_with_transcript=-123bp_to_ENST00000375790_5end | ||
|cluster_id=chr10:28035112..28035130,- | |||
|coexpression_cluster_id=C2053 | |coexpression_cluster_id=C2053 | ||
|description=CAGE_peak_5_at_MKX_5end | |description=CAGE_peak_5_at_MKX_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000057!2.83e-14!75;CL:0002620!3.99e-11!23;CL:0002556!8.87e-10!6;CL:0002552!1.69e-08!5 | |ontology_enrichment_celltype=CL:0000057!2.83e-14!75;CL:0002620!3.99e-11!23;CL:0002556!8.87e-10!6;CL:0002552!1.69e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.58e-21;23!CL:0002617;3.05e-11;2!CL:0002556;1.18e-08;6!CL:0000135;2.86e-08;3!CL:0000388;2.86e-08;3!CL:0002622;8.87e-08;3!CL:0000057;1.46e-07;73!CL:0002574;6.79e-07;1 | |ontology_enrichment_celltype_v019=CL:0002620;2.58e-21;23!CL:0002617;3.05e-11;2!CL:0002556;1.18e-08;6!CL:0000135;2.86e-08;3!CL:0000388;2.86e-08;3!CL:0002622;8.87e-08;3!CL:0000057;1.46e-07;73!CL:0002574;6.79e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.31e-21,23;CL:0000057,5.13e-19,76;CL:0002617,4.65e-11,2;CL:0002556,9.85e-09,6;CL:0000135,2.48e-08,3;CL:0000388,2.48e-08,3;CL:0002622,1.21e-07,3;CL:0002574,6.43e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!1.04e-08!5;DOID:450!1.04e-08!5;DOID:66!1.04e-08!5;DOID:423!1.04e-08!5;DOID:0080000!1.04e-08!5;DOID:11722!1.04e-08!5 | |ontology_enrichment_disease=DOID:17!1.04e-08!5;DOID:450!1.04e-08!5;DOID:66!1.04e-08!5;DOID:423!1.04e-08!5;DOID:0080000!1.04e-08!5;DOID:11722!1.04e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;7.26e-17;5!DOID:450;7.26e-17;5!DOID:66;7.26e-17;5!DOID:423;7.26e-17;5!DOID:0080000;7.26e-17;5!DOID:11722;7.26e-17;5 | |ontology_enrichment_disease_v019=DOID:17;7.26e-17;5!DOID:450;7.26e-17;5!DOID:66;7.26e-17;5!DOID:423;7.26e-17;5!DOID:0080000;7.26e-17;5!DOID:11722;7.26e-17;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,8.97e-17,5;DOID:450,8.97e-17,5;DOID:66,8.97e-17,5;DOID:423,8.97e-17,5;DOID:0080000,8.97e-17,5;DOID:11722,8.97e-17,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.25e-15!115;UBERON:0000033!1.54e-14!123;UBERON:0001049!5.80e-14!57;UBERON:0005068!5.80e-14!57;UBERON:0006241!5.80e-14!57;UBERON:0007135!5.80e-14!57;UBERON:0000153!3.01e-13!129;UBERON:0007811!3.01e-13!129;UBERON:0005743!5.83e-12!86;UBERON:0000955!6.13e-12!69;UBERON:0006238!6.13e-12!69;UBERON:0003080!6.77e-12!42;UBERON:0001017!3.18e-11!82;UBERON:0002616!4.21e-11!59;UBERON:0002780!5.22e-11!41;UBERON:0001890!5.22e-11!41;UBERON:0006240!5.22e-11!41;UBERON:0000073!1.29e-10!94;UBERON:0001016!1.29e-10!94;UBERON:0000475!2.26e-10!365;UBERON:0003075!2.47e-10!86;UBERON:0007284!2.47e-10!86;UBERON:0002020!4.23e-10!34;UBERON:0003528!4.23e-10!34;UBERON:0001758!8.87e-10!6;UBERON:0003672!8.87e-10!6;UBERON:0003056!1.13e-09!61;UBERON:0002619!1.14e-09!22;UBERON:0001950!1.58e-09!20;UBERON:0002346!1.77e-09!90;UBERON:0001893!3.44e-09!34;UBERON:0001869!8.46e-09!32;UBERON:0000200!9.05e-09!6;UBERON:0004121!1.05e-08!169;UBERON:0003102!1.34e-08!95;UBERON:0002791!2.47e-08!33;UBERON:0000924!3.18e-08!173;UBERON:0006601!3.18e-08!173;UBERON:0003129!3.41e-08!11;UBERON:0000956!3.94e-08!25;UBERON:0000203!3.94e-08!25;UBERON:0002298!8.29e-08!8 | |ontology_enrichment_uberon=UBERON:0007023!2.25e-15!115;UBERON:0000033!1.54e-14!123;UBERON:0001049!5.80e-14!57;UBERON:0005068!5.80e-14!57;UBERON:0006241!5.80e-14!57;UBERON:0007135!5.80e-14!57;UBERON:0000153!3.01e-13!129;UBERON:0007811!3.01e-13!129;UBERON:0005743!5.83e-12!86;UBERON:0000955!6.13e-12!69;UBERON:0006238!6.13e-12!69;UBERON:0003080!6.77e-12!42;UBERON:0001017!3.18e-11!82;UBERON:0002616!4.21e-11!59;UBERON:0002780!5.22e-11!41;UBERON:0001890!5.22e-11!41;UBERON:0006240!5.22e-11!41;UBERON:0000073!1.29e-10!94;UBERON:0001016!1.29e-10!94;UBERON:0000475!2.26e-10!365;UBERON:0003075!2.47e-10!86;UBERON:0007284!2.47e-10!86;UBERON:0002020!4.23e-10!34;UBERON:0003528!4.23e-10!34;UBERON:0001758!8.87e-10!6;UBERON:0003672!8.87e-10!6;UBERON:0003056!1.13e-09!61;UBERON:0002619!1.14e-09!22;UBERON:0001950!1.58e-09!20;UBERON:0002346!1.77e-09!90;UBERON:0001893!3.44e-09!34;UBERON:0001869!8.46e-09!32;UBERON:0000200!9.05e-09!6;UBERON:0004121!1.05e-08!169;UBERON:0003102!1.34e-08!95;UBERON:0002791!2.47e-08!33;UBERON:0000924!3.18e-08!173;UBERON:0006601!3.18e-08!173;UBERON:0003129!3.41e-08!11;UBERON:0000956!3.94e-08!25;UBERON:0000203!3.94e-08!25;UBERON:0002298!8.29e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.21e-09;41!UBERON:0001758;1.18e-08;6!UBERON:0003672;1.18e-08;6!UBERON:0007846;2.86e-08;3!UBERON:0000043;2.86e-08;3!UBERON:0007845;2.86e-08;3!UBERON:0011137;6.41e-08;11!UBERON:0010323;6.41e-08;11!UBERON:0003129;1.77e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002097;7.21e-09;41!UBERON:0001758;1.18e-08;6!UBERON:0003672;1.18e-08;6!UBERON:0007846;2.86e-08;3!UBERON:0000043;2.86e-08;3!UBERON:0007845;2.86e-08;3!UBERON:0011137;6.41e-08;11!UBERON:0010323;6.41e-08;11!UBERON:0003129;1.77e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.22e-13,99;UBERON:0002097,4.24e-11,41;UBERON:0002199,1.07e-09,46;UBERON:0002416,1.07e-09,46;UBERON:0001758,9.85e-09,6;UBERON:0003672,9.85e-09,6;UBERON:0007846,2.48e-08,3;UBERON:0000043,2.48e-08,3;UBERON:0007845,2.48e-08,3;UBERON:0010323,6.42e-08,11;UBERON:0003129,1.52e-07,7 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0.704772020479856,3.00219895059391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61246251376468,0.368502951935304,0.826606249406124,10.6920257155385,6.92347401979959,0,0,0.673344455816265,0.250237039743928,1.6623846929051,0.877955241761676,2.45190236639216,5.70904623845068,0,1.07633781413317,2.34913127700424,0.635795703478686,1.20036438433761,1.13357782162283,4.12224864073007,7.258557396932,0.337552664482532,0.292311015483596,1.00973509697646,2.02509777013059,0,1.77504796258307,3.02256294682921,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0.482022059766964,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.271265023699736,0,0.178428988797162,2.20783381047509,0,1.50473049863859,0,3.10419213877515,0,0,3.5622281931914,0,0,0,0,0,0,0,0,0.248107807818777,0.920771839728375,0.561320188866147,0,6.65219423786715,0.160853921143607,0,0,0,0,0,0,0,0,0,1.03333003348146,0.728364672026868,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54433669422759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,2.22617410045812,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0.969332746095218,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0,0,0,1.52513848926586,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0.51595809741485,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0.443175571691151,0,0,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0.836822770498666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.244052529803926,0.625954653532499,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0.321146125482298,0,0.319267718114302,0.41023272848151,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0.49131575253029,0,0.742913430802341,0,0.413373593002368,0.317079050969534,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0,0,0.747667062745149,0.394636641377094,0,0,0.706437835654626,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0.297046400327086,0.4226557275834,1.86919826156599,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0,0,2.60396512716726,3.69740502905135,0.432626562123789,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0,0,0,0,1.23345048838675,0,0,0,0,0,0.0717222053926763,0,0,2.88163833869832,1.9307228228694,0,0,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=1.09007027562334,1.07050261945492,0.704772020479856,3.00219895059391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61246251376468,0.368502951935304,0.826606249406124,10.6920257155385,6.92347401979959,0,0,0.673344455816265,0.250237039743928,1.6623846929051,0.877955241761676,2.45190236639216,5.70904623845068,0,1.07633781413317,2.34913127700424,0.635795703478686,1.20036438433761,1.13357782162283,4.12224864073007,7.258557396932,0.337552664482532,0.292311015483596,1.00973509697646,2.02509777013059,0,1.77504796258307,3.02256294682921,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0.482022059766964,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.271265023699736,0,0.178428988797162,2.20783381047509,0,1.50473049863859,0,3.10419213877515,0,0,3.5622281931914,0,0,0,0,0,0,0,0,0.248107807818777,0.920771839728375,0.561320188866147,0,6.65219423786715,0.160853921143607,0,0,0,0,0,0,0,0,0,1.03333003348146,0.728364672026868,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54433669422759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,2.22617410045812,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0.969332746095218,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0,0,0,1.52513848926586,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0.51595809741485,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0.443175571691151,0,0,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0.836822770498666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.244052529803926,0.625954653532499,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0.321146125482298,0,0.319267718114302,0.41023272848151,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0.49131575253029,0,0.742913430802341,0,0.413373593002368,0.317079050969534,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0,0,0.747667062745149,0.394636641377094,0,0,0.706437835654626,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0.297046400327086,0.4226557275834,1.86919826156599,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0,0,2.60396512716726,3.69740502905135,0.432626562123789,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0,0,0,0,1.23345048838675,0,0,0,0,0,0.0717222053926763,0,0,2.88163833869832,1.9307228228694,0,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p5@MKX | |short_description=p5@MKX | ||
}} | }} |
Latest revision as of 19:28, 17 September 2015
Short description: | p5@MKX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MKX_5end |
Coexpression cluster: | C2053_Fibroblast_tridermal_tenocyte_transitionalcell_normal_Pancreatic_Synoviocyte |
Association with transcript: | -123bp_to_ENST00000375790_5end |
EntrezGene: | MKX |
HGNC: | 23729 |
UniProt: | Q8IYA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.31e-21 | 23 |
fibroblast | 5.13e-19 | 76 |
adipocyte of breast | 4.65e-11 | 2 |
fibroblast of periodontium | 9.85e-09 | 6 |
fibrocyte | 2.48e-08 | 3 |
tendon cell | 2.48e-08 | 3 |
prostate stromal cell | 1.21e-07 | 3 |
stromal cell of pancreas | 6.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.22e-13 | 99 |
skin of body | 4.24e-11 | 41 |
integument | 1.07e-09 | 46 |
integumental system | 1.07e-09 | 46 |
periodontium | 9.85e-09 | 6 |
dentition | 9.85e-09 | 6 |
dense regular connective tissue | 2.48e-08 | 3 |
tendon | 2.48e-08 | 3 |
regular connective tissue | 2.48e-08 | 3 |
cranial skeletal system | 6.42e-08 | 11 |
skull | 1.52e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.97e-17 | 5 |
myotonic disease | 8.97e-17 | 5 |
muscle tissue disease | 8.97e-17 | 5 |
myopathy | 8.97e-17 | 5 |
muscular disease | 8.97e-17 | 5 |
myotonic dystrophy | 8.97e-17 | 5 |