FFCP PHASE1:Hg19::chr15:45028572..45028586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140691 | |EntrezGene=140691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17857 | |HGNC=17857 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WT6 | |UniProt=Q86WT6 | ||
|association_with_transcript=12bp_to_ENST00000329464,NM_080745,NM_182985_5end | |association_with_transcript=12bp_to_ENST00000329464,NM_080745,NM_182985_5end | ||
|cluster_id=chr15:45028572..45028586,+ | |||
|coexpression_cluster_id=C3491 | |||
|description=CAGE_peak_16_at_TRIM69_5end | |description=CAGE_peak_16_at_TRIM69_5end | ||
|id=chr15:45028572..45028586,+ | |id=chr15:45028572..45028586,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.23e-21!140;CL:0002031!2.39e-18!124;CL:0000453!5.21e-18!5;CL:0002032!6.72e-17!165;CL:0000837!6.72e-17!165;CL:0000037!5.59e-16!172;CL:0000566!5.59e-16!172;CL:0002087!8.76e-16!119;CL:0000988!8.70e-15!182;CL:0002057!7.66e-13!42;CL:0000860!7.61e-12!45;CL:0000815!3.12e-11!2;CL:0000792!3.12e-11!2;CL:0002677!3.12e-11!2;CL:0000990!4.84e-10!8;CL:0000838!1.06e-09!52;CL:0000945!1.74e-09!24;CL:0000826!1.74e-09!24;CL:0000557!1.74e-09!71;CL:0000542!1.76e-09!53;CL:0000051!1.76e-09!53;CL:0002009!5.53e-09!65;CL:0000763!2.17e-08!112;CL:0000049!2.17e-08!112;CL:0000451!3.20e-08!10;CL:0000839!4.54e-08!70;CL:0000898!9.08e-08!3;CL:0002194!1.03e-07!63;CL:0000576!1.03e-07!63;CL:0000040!1.03e-07!63;CL:0000559!1.03e-07!63;CL:0000766!2.90e-07!76 | |ontology_enrichment_celltype=CL:0000738!6.23e-21!140;CL:0002031!2.39e-18!124;CL:0000453!5.21e-18!5;CL:0002032!6.72e-17!165;CL:0000837!6.72e-17!165;CL:0000037!5.59e-16!172;CL:0000566!5.59e-16!172;CL:0002087!8.76e-16!119;CL:0000988!8.70e-15!182;CL:0002057!7.66e-13!42;CL:0000860!7.61e-12!45;CL:0000815!3.12e-11!2;CL:0000792!3.12e-11!2;CL:0002677!3.12e-11!2;CL:0000990!4.84e-10!8;CL:0000838!1.06e-09!52;CL:0000945!1.74e-09!24;CL:0000826!1.74e-09!24;CL:0000557!1.74e-09!71;CL:0000542!1.76e-09!53;CL:0000051!1.76e-09!53;CL:0002009!5.53e-09!65;CL:0000763!2.17e-08!112;CL:0000049!2.17e-08!112;CL:0000451!3.20e-08!10;CL:0000839!4.54e-08!70;CL:0000898!9.08e-08!3;CL:0002194!1.03e-07!63;CL:0000576!1.03e-07!63;CL:0000040!1.03e-07!63;CL:0000559!1.03e-07!63;CL:0000766!2.90e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.83e-70;5!CL:0000990;2.30e-39;8!CL:0000451;2.52e-32;10!CL:0001014;1.85e-12;2!CL:0001016;1.85e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.59e-70,5;CL:0000990,2.19e-39,8;CL:0000451,2.42e-32,10;CL:0001014,1.85e-12,2;CL:0001016,1.85e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.54e-09!80;UBERON:0001474!1.10e-08!86;UBERON:0002390!5.01e-08!102;UBERON:0003061!5.01e-08!102;UBERON:0002193!4.73e-07!112;UBERON:0004765!5.33e-07!101;UBERON:0001434!5.33e-07!101;UBERON:0002405!8.58e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p16@TRIM69 | |short_description=p16@TRIM69 | ||
}} | }} |
Latest revision as of 19:31, 17 September 2015
Short description: | p16@TRIM69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TRIM69_5end |
Coexpression cluster: | C3491_migratory_CD4_splenic_immature_xeroderma_b_lymphangiectasia |
Association with transcript: | 12bp_to_ENST00000329464, NM_080745, NM_182985_5end |
EntrezGene: | TRIM69 |
HGNC: | 17857 |
UniProt: | Q86WT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.59e-70 | 5 |
conventional dendritic cell | 2.19e-39 | 8 |
dendritic cell | 2.42e-32 | 10 |
CD1a-positive Langerhans cell | 1.85e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.85e-12 | 2 |